YALI0D05489g

Overview

Description similar to uniprot|P38793 Saccharomyces cerevisiae YHR070w tRNA modification enyzyme
Locus type CDS
Locus tag YALI0D05489g

Location

Species Yarrowia lipolytica Positions 710034..711598
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1565 (nuc.)
Previous locus YALI0D05467g Next locus YALI0D05511g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05489g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05489gYALI0D05489g_mRNA-001YALI0D05489g_CDS-001

Nucleotide sequence

 

>YALI0D05489g
ATGAAGTTCAACTTCTGGAAGGGTCTGTGGAAACCGAAATCTCTCACGCCGACTCTCTCA
CACCGTCTCTACCGCAGAATGTACACACCGCAACCCCCGTTGAACCGCGAAATGACGGTT
TTGGACCGGTCCAAGTTCACCGTGTCTCTCAACCTGGCCCTGGCCAAGTTCCCTGATCCG
AAATACATTGCGCAGTTCGCCAAGGAGTGCAAGGCCGACATTTTGCAGCTGCGAAGCATT
AACCACGTTCAGAAGACGGACGACAATGGCCGGGCCGTTCTTCTGAGACACGATCTGGAT
CTCGAGGGAGGTGAAGATGTAGCCTCCAAGGTTATGAGCCAGCTGAGTCCCCGAGGAAAG
GAGCTGCTGACCGAGGCCCAGGCAGATATTACCAAGATTGTGAAAGATCTCGACTACGAC
TTTTGGCGAGCCGACGAGATTTTCTACTCCGTGTTGCCAGTCACGGAGAAAGACGAGATT
CCCAGTGGATTCTCCATGGTGGGACATGTGGCTCATCTCAACCTGCGGTCTGAATGGAAG
GATTACGACCGACTCATTGGCCAGGTGATTCTCGATAAGAACCCCCGAGTCAAGACCGTG
GTCAACAAGGTCGATTCTATCGACACGAAGTTCCGAACGTTCAAGATGGACGTTCTGGCC
GGTGAAGATAACACCGAGGTGGAGCAGCATGAGAGTGGCTGCCGATTCCAGTTTGATTTC
GCAAAGGTGTACTGGAACTCGCGACTGCATACCGAGCACGACCGGCTGGTCAGCCTGTTC
AGAGGAGAGGCTTCTTCGCGTGAACGTAAGCAGCAGGAGCGAGCCAAGAGAGAGAACCAC
GAGAAGAGCACCGAAACCGCTGTCGAGCCCGACAACACACCTGCTACGGCTGTCTGTGAC
GTCTTTGCAGGCGTGGGTCCCTTTGCCGTTCCCTCAGGACGAACTTCTCTGTTTGTCATG
GCTAACGATCTCAACCCTTACTCGTACGAGGCTCTGGAACATAATGTCAAGCTCAACAAG
GTCTCCGAGTATGTCAAGTGCTTCAATCTCGACGGCGCAGAGTACGTGCAACAGAGCATG
AAGCTGCTGGACGAACACAGAAGGACCCAGCCCACTATTAACCCTGTTCAGGTGCGAAAG
CGAAAGGCCGGACAGCCCGTGGTCAAGCAAGACATTCCCAATCACTACAGCCACTACGTC
ATGAACTTGCCCGACTCGGCCATCGAGTTTCTGTGGTCTTTCAAGGGTCTGTACACGACT
GTCGACGGTCTCTCCCAGGACACTCCTCTTCCTCATGTCCATGTTCATTGCTTCCACAAG
TGGGAGGCTGGAGAAGAAGAGCCCTCCAAGGAGGAGACCAAGGCTGCTCTTTTGGAGCGG
GTGTACAAGCAGATCGACGTGCGACTGGACCCCAACGAGGTTGGAATGCATTGGGTTCGA
AAGGTGTCTCCCAAGAAGGACATGTTTTGCATTTCTTTCGAGCTGCCCAAGGAGGTTGCA
TGGGCCCCTCAGGTTAACAAGGAGTAAATGTATATATATGTATTATAATGGTAATGACGG
CGATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05489g_CDS-001

Protein length: 509 aa.
Product: tRNA(m(1)G37)methyltransferase, putative

>YALI0D05489g_CDS-001 MKFNFWKGLWKPKSLTPTLSHRLYRRMYTPQPPLNREMTVLDRSKFTVSLNLALAKFPDP
KYIAQFAKECKADILQLRSINHVQKTDDNGRAVLLRHDLDLEGGEDVASKVMSQLSPRGK
ELLTEAQADITKIVKDLDYDFWRADEIFYSVLPVTEKDEIPSGFSMVGHVAHLNLRSEWK
DYDRLIGQVILDKNPRVKTVVNKVDSIDTKFRTFKMDVLAGEDNTEVEQHESGCRFQFDF
AKVYWNSRLHTEHDRLVSLFRGEASSRERKQQERAKRENHEKSTETAVEPDNTPATAVCD
VFAGVGPFAVPSGRTSLFVMANDLNPYSYEALEHNVKLNKVSEYVKCFNLDGAEYVQQSM
KLLDEHRRTQPTINPVQVRKRKAGQPVVKQDIPNHYSHYVMNLPDSAIEFLWSFKGLYTT
VDGLSQDTPLPHVHVHCFHKWEAGEEEPSKEETKAALLERVYKQIDVRLDPNEVGMHWVR
KVSPKKDMFCISFELPKEVAWAPQVNKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG