YALI0D05005g

Overview

Description similar to uniprot|P34228 Saccharomyces cerevisiae YBL066c SEF1 putative transcription factor
Locus type CDS
Locus tag YALI0D05005g

Location

Species Yarrowia lipolytica Positions 640566..642998
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2433 (nuc.)
Previous locus YALI0D04983g Next locus YALI0D05041g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05005g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05005gYALI0D05005g_mRNA-001YALI0D05005g_CDS-001

Nucleotide sequence

 

>YALI0D05005g
ATGAAGCGACCGGCCACAGACTCTCCCGAGGAATACGGCGACGACCGGCTCGACGGCGCC
AAGCCGCCTCTCAAAACCCGTCCGGTCACGTCCTGTTCCATGTGTCGCCAGCAAAAGGTC
AAGTGTGATGCTGGCAAAATGTACCCCAACGCGTGCACCCGATGCGCGAAGCTCAACAAG
CATTGCGTGGTCGACCCGCTGTATAAACCGCCCAAGGGCTCGCAGCTCAAGTCACTGATG
GACGACGTGCACCAGCTGCGCCAGGAGATTGAGATGCTGAGACAGCCGCAGCAGCCGGCC
CCAGTGCAGACTCCAGTGTCCGTGCCGCCAGTAACACAGATGGAACAGCAGCAACAGCAG
CAGTCTGAACTGCATCAGATGATACCACCACAGAACCATACACACCATCCCCATCATATC
TTACACGCACCACCACACACTCCCTACCCCCCTCATCCACACACACAGTTGCCACCACTA
CCGCAACAACCACAGGCACAAATACAGGCACAAATACAGGCACAATCACATCCGCCACAC
CTCCCTCCCATTACCATCCACCCCAACCACACGTCCAAGCCGGTCACAACCACAACCTCG
GCTTCTCCGTCGTCCACTTACACGCTAAATGGAGTCACGCTCAACAATGAACGCGTCTTG
CGGCTCCACAAACGCTTTGTAGAACGCTATCTGCCGTACCTGCCCATTTTGGAGACCCAC
TCGCCCGAAGAGCTATACGAGCAGTCAAAGCTGCTGTTCTGGACCGTTATGGTCACGGCA
TGCCAGTCTGACCCTAACCCGCAGCAATACAACCAGCTATGGCCGCACGTCAAGAACCTC
ATCATCGAAACGTGCTGGTTGCACACACCACGGTCCACCCATGTGGTTCAGGCCCTGCTG
GTTCTGGCCACGTGGCCTCTTCCAAACATGAAGATTCTTGACGACTGGAGCTACCGGCTC
ATCGGCCTCGCCAAAAACATTTCGCTGCAGCTGGGCCTGCACCGGGGTGAGTTTGTGTCC
GAGTTTTCACGTTCGCAAGTGCGAATGACGGATGCAGTCAAATGGCGAACCCGTTCGTGG
ATGGCGATCTTCTTCTTGGAACAGGTCTGGTGTTCTTCTCTTGGCCTCCCACCGACAACC
CAGGCCGACTCGCTCATCAACAACGCCGCAACCAAGCTGCCGTCCTTCTCATTCTCGATT
CTCGTCCGGCTGTCGGCCTTTTGTTCGCGACTCATCAACCTTGTGGGCAACTCACAGACA
TCGGCAGACGGTCTCATCCCCTACGACGACCGCATCAACGTGCTGGCCGTTATCAACAAT
GAGCTTGACATTGTGGCCCAACAGCTGGATCTGTCGGAGCCCTCAGCGGAAATGTACTAC
CTTAACATCCGACTGATGATTGCGGTCTTCTCCTTCATCGGGGGCACAGACACGCGGTTC
ATCATGAACGCGTACAATGCGGCGACGCGAGCCGTCGCCATTCTGTGTGGATTGCCTTAT
CAGATCACACAGTATCCTATTTGGATGCGTCAATGTGCGTCTTTCGCAGCCACGGTTCTC
TTCCGACTTCATTTGAGCCCCCACTTGCTGCCCAAATACCATGAGACCGCTCGAGGATCC
GTAGTGGCCCTACACGCGAAGTTCAAGCAGATGGTTGCCCACTGGCCCGTGGACAACGAC
ATTTCGCGAATCGCCAAGGTTGTAGAAAAACTGAATCGCACGATTGTGACGAATCCGGAG
CTTTTCAAGACCCCAGGCATTGTGTCACGAATGCGGTCACATCTATCTGCATCCTTGTTT
TACGAGCTGATTTGGATCATTCACGAAGCTCAACGGAGAAACGGCGGAGGCAACTCCCAG
GGAGTTTCCACCAGCAACACCGGCGGCCGGAACACACCGACACAGCAGACGGCTTCTTCC
AGCGTTGCTGCGTTAACAAACAATAGCAGCAACGGCGGCAATACTGCAGGAGCCGGGACT
GCTACGAATGGCGGTGGAGCCACGGCTGCTCCGTCCACAAACGGGTCTTCGGGAGCTGCT
CCGATCAACGGGATCATCAAGACTGACTCGGACGACCCTGATCCGTCAATGGCTCCTTTG
CAGCTCGAGCGACCGCCAGTGGTCAAGGATGAGCAGTTTAACGATTTCGGCTTTCCTCCG
GATCTGGGTGTGATGGATATCATGCAGGATTGGATGGACGGCAAGGGCGATGACTTTTTG
GGATGGATGGATGTCAATCTGTCGCCAGAATTTTAAAGAACTATCAGCCTGGAATTACGA
ATGCCCAATACTCCACCAGGGAACCTATTGGCTGTGCCTCGCAAACGTTGAATGAGTTAG
AAATTTCCATGGCCGTGGCAACATCATTGTTTCTCTGCTGCCAACAGTGTGTACATATAT
ATTTATTAATGACGATTTTGATTATGGATATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05005g_CDS-001

Protein length: 752 aa.
Product: Transcription factor, putative

>YALI0D05005g_CDS-001 MKRPATDSPEEYGDDRLDGAKPPLKTRPVTSCSMCRQQKVKCDAGKMYPNACTRCAKLNK
HCVVDPLYKPPKGSQLKSLMDDVHQLRQEIEMLRQPQQPAPVQTPVSVPPVTQMEQQQQQ
QSELHQMIPPQNHTHHPHHILHAPPHTPYPPHPHTQLPPLPQQPQAQIQAQIQAQSHPPH
LPPITIHPNHTSKPVTTTTSASPSSTYTLNGVTLNNERVLRLHKRFVERYLPYLPILETH
SPEELYEQSKLLFWTVMVTACQSDPNPQQYNQLWPHVKNLIIETCWLHTPRSTHVVQALL
VLATWPLPNMKILDDWSYRLIGLAKNISLQLGLHRGEFVSEFSRSQVRMTDAVKWRTRSW
MAIFFLEQVWCSSLGLPPTTQADSLINNAATKLPSFSFSILVRLSAFCSRLINLVGNSQT
SADGLIPYDDRINVLAVINNELDIVAQQLDLSEPSAEMYYLNIRLMIAVFSFIGGTDTRF
IMNAYNAATRAVAILCGLPYQITQYPIWMRQCASFAATVLFRLHLSPHLLPKYHETARGS
VVALHAKFKQMVAHWPVDNDISRIAKVVEKLNRTIVTNPELFKTPGIVSRMRSHLSASLF
YELIWIIHEAQRRNGGGNSQGVSTSNTGGRNTPTQQTASSSVAALTNNSSNGGNTAGAGT
ATNGGGATAAPSTNGSSGAAPINGIIKTDSDDPDPSMAPLQLERPPVVKDEQFNDFGFPP
DLGVMDIMQDWMDGKGDDFLGWMDVNLSPEF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG