YALI0D04719g

Overview

Description weakly similar to uniprot|Q12386 Saccharomyces cerevisiae YOR141c ARP8 Actin-related protein
Locus type CDS
Locus tag YALI0D04719g

Location

Species Yarrowia lipolytica Positions 581998..584235
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2238 (nuc.)
Previous locus YALI0D04697g Next locus YALI0D04741g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04719g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04719gYALI0D04719g_mRNA-001YALI0D04719g_CDS-001

Nucleotide sequence

 

>YALI0D04719g
ATGGACGACATTGACAGTGACGATATCCCCTCATCGACTTTGGGAGCAACTCCCAGTGAG
CTGGGGGACTATGAGCCCGCATCTTTGCCCGATGATCTCAATCGGGGCACCGAGACGCCT
ACTGGCACTCCTTCAGCAACTCCCACAGGCACACCTGCTCCTGGAGCGTCAAAGAAGAGC
TCCTCCAAGGCTGGAGTCAACTCTTTGACCAAGTCCGGGGCTCTCAAGCAGAAACCTGGT
CCGAAGCCCGGAGGAGGGAAGGTCAAGAGCTCTTCTGGAGGCTCAGCGAAAGCTGCTGTC
AACCCGGGTCTCAAGCAGACCACCTTCTCCATGGTGACACCCATCAACCAGAAAAACTAC
TACACCGAGTATCTGAAGCGCGACGACCAGATATACGTCTACCGGCAGGTGCAGGAGGAG
ACCAAGAAGGCCAAGGCCGGATCGGCGGCTGTATCTAACAACATCAAGGGTACACCTTCG
GCAGCAGCAACGCCGGATCCCGATGGAACAGATGGAAAGGAGGAGAACCAGACGATTGTG
ATTCATCCAGGATCGCGCAACTTGCGGATTGGATTTGGAGTGGATCCGTATCCCAAGACA
GTCAAGATGGTGATTGCGAGAAGACAACATGAAACCAAGAAGGTGAAGCAGGAAGAAGGA
GCAGAACAAGAGGACGTGGATATGGCCGATGACAGCGACCCGATCATCGCCGCCATCAAG
ACGGTTAAAAAGGATCTCAAGGAGCGAATGAAGTTCTACAAATGTCGAATCCAGCCGGGA
TCGACAGATCTAACCACCAACTACAACACCAAAAACACGCAACCGGAAGAGATTCCTGAA
CACAACGACCCCTCCAAGGTGGACTGGACAGACACCTCGGACAAAAAGGAATACTATGTG
GGCGAGTCGGCACTGAGAGTCAAGGACTCCAATTACGCATTGCGATGGCCCATCATTCAT
GGCTGCTTCAACGAGACGAAAATGTACTCGTCACCCCAGGAGGTGCTAGGAGACATGGCT
ATTATCCTGGTGGAGGCTCTCGAAGCGGAACTGGGTGTAAAATTCACAGACTACAAGAAT
TACAATGTTGTTCTGTTGATTCCAGACCTCTACGACAAGACCTACGTTTCTTCGCTGGTC
GACTTGTTGCTTCACAAGATGGATTTCCCCCGTGTAGCTCTTCTCCAGGAAGGAATGGGA
GCCACATTTGGAGCTGGAATCTCCACTTCCTGTGTGATTGATGTCGGTGCCCAGAAAACA
TCCATCTGCTGTGTTGAAGATGGTATGGTTGTTCCTGATTCTCGGGTAAACCTGAAATAT
GGAGGAGATGACGTGACCAACGCTTTCCTCAAGCTGCTCCAGAACATTTCATTCCCCTAC
AACGTCGATCCCAACGATACCAACGACATGTTGTTAATGGAGGAGCTCAAAACACAGTAT
GCTACGGCAGACGAGGCATCTATCGGAGTCTCTACCGGTCAATTGATTCGTCCACGACAA
AACAAGCTGACTCAAAAGTACACTTTCAAATTTTACGACGAGGGCATGCTTGCACCCTTG
GGTCTGTTCTATCCTGAGCTGTTCGAGCCACTGAACACCATGTACAAGGAGTTTTTCCGA
GACCGACATCGTCTGTTCCCCCGAAATATGGATGTTTACGAGTCCAACAAGGAGGACAAT
CCCGTTTCTGGCGCTCAAACTGCTCTTCTCATCAAGCAGGGATTGATCGAGGCACCTGAA
GAGCCCGTGGAAGGAGAGGCAGTAGTTGAGAAGGAGATTGTGGACGACGTGGAACAGCCG
TATCTGTTTCTCACCGGACTGGATCATGCTGTTATCCAGTCTATCAAAAGTGCTGCTGTT
TCGGATCCCTCTAGACCCGGCAAGATGTACGAGAACATCATTATTATTGGAGGAGGCGCC
CAGTTGGCTGGGTTCGAGACTCTGTTGGTGGACCGACTTGGAATCTGGCGGTCTATGGCT
CGTAACGACGGTGAGGACGACGGTGTTTCTGATGAGGCCATCGCGGTCATGCCTCCTCCT
CGAGACATGGATCCTCAGATTCTGACCTGGAAGGGAGGCGCCGTCTTTTCGCGACTCAAG
GTTGTCGAAGAAATGTACATTACCCAGAAGGAGTGGGATTTGTTGGGTCCTCGAAGTATT
CATTACCGAACCATGTTTGCTTACTGATCATATCCTAGTGTATCGTTAATATATTGTAAA
ACAAGGAGGTACATATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04719g_CDS-001

Protein length: 729 aa.
Product: Conserved hypothetical protein

>YALI0D04719g_CDS-001 MDDIDSDDIPSSTLGATPSELGDYEPASLPDDLNRGTETPTGTPSATPTGTPAPGASKKS
SSKAGVNSLTKSGALKQKPGPKPGGGKVKSSSGGSAKAAVNPGLKQTTFSMVTPINQKNY
YTEYLKRDDQIYVYRQVQEETKKAKAGSAAVSNNIKGTPSAAATPDPDGTDGKEENQTIV
IHPGSRNLRIGFGVDPYPKTVKMVIARRQHETKKVKQEEGAEQEDVDMADDSDPIIAAIK
TVKKDLKERMKFYKCRIQPGSTDLTTNYNTKNTQPEEIPEHNDPSKVDWTDTSDKKEYYV
GESALRVKDSNYALRWPIIHGCFNETKMYSSPQEVLGDMAIILVEALEAELGVKFTDYKN
YNVVLLIPDLYDKTYVSSLVDLLLHKMDFPRVALLQEGMGATFGAGISTSCVIDVGAQKT
SICCVEDGMVVPDSRVNLKYGGDDVTNAFLKLLQNISFPYNVDPNDTNDMLLMEELKTQY
ATADEASIGVSTGQLIRPRQNKLTQKYTFKFYDEGMLAPLGLFYPELFEPLNTMYKEFFR
DRHRLFPRNMDVYESNKEDNPVSGAQTALLIKQGLIEAPEEPVEGEAVVEKEIVDDVEQP
YLFLTGLDHAVIQSIKSAAVSDPSRPGKMYENIIIIGGGAQLAGFETLLVDRLGIWRSMA
RNDGEDDGVSDEAIAVMPPPRDMDPQILTWKGGAVFSRLKVVEEMYITQKEWDLLGPRSI
HYRTMFAY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG