YALI0D04697g

Overview

Description similar to uniprot|P38860 Saccharomyces cerevisiae YHR168w probable GTP-binding protein
Locus type CDS
Locus tag YALI0D04697g

Location

Species Yarrowia lipolytica Positions 579872..581491
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1620 (nuc.)
Previous locus YALI0D04675r Next locus YALI0D04719g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04697g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04697gYALI0D04697g_mRNA-001YALI0D04697g_CDS-001

Nucleotide sequence

 

>YALI0D04697g
ATGCTGACCTCGAGAACTCCAGGTGTGGGCCGTCTGCGGCTTCCACTGGTGTTTTCCCGA
GATTACCACAAGAAGCGACGTCAGATGAAGCAGAAAGATCTCGAAAAAGAGTCGCGACAG
GACGCCGTACAGCGCTTTTTTGACAAAGATCAGAAACGGTTCGCCGTCATGCCCTACAAG
TCGCCCTACGACGCAGTCAAGTACCACGAGGCCCAGCAGGCGGTAAAGGATGGATCACAC
TTTCTGGATGTGCGACTGGTAAAGTGCTCTGCTGGAAAGGGAGGTAATGGACGAGTCTCG
TTTGCCAGAGAAGCCATGATGCCCTATGGACCTGCTGACGGAGGAGATGGAGGAGAAGGA
GGGTCAGTATACATCCAAGCGGTAGACTCCATCCGAACGTTGAAGAACCTCAGTTTCAAG
TATATGGCTGGAGCCGGAAAAGCTGGAGGATCGTCCCATATGTACGGACATCGAGGAACA
GATGTGCTTCTACAGGTGCCTGTTGGAACTGTTGTCAAGTGGTGTCCCGATCCTAAGCGA
GACGTTGAGCAGGATCTCATCAAGGTCGATCCTGAGGAGGCTGCCCGAAAGTATCCCCCA
CAGTTTCTTGAAAACGGAGAACCGGTACCTGATCACAAGGAGGTTGTGGGTGTGGAAGTG
GCTGAGGGAATGTTCCACATGAACAGAGGCTACCTGCGTCTCAACAGAGCCACTATGGCC
GATGGAGAGGGATGGACCTACGAGAACCCCCAGGTGGCCAACTGGTGCAATGATCCCAAG
AATCCTCCCGAGTTCTTCACTCGAACTAAGGAGGCCACCAAGTTCGATGACGCTGTGCTC
AGATCCACTGAAGAGGCTACAGACGTGTTCCCCGTGGACGGTCTGGATCTGTGTGAGCCA
GGAAAGCCTCCGCAGCTGCTGCTCAAGGGAGGAGCGGGAGGAGCCGGTAACATGAGATAC
CATCGAGACGATATTCGAAACCCCAAGTTTGCCAAGTTGGGCCGATCCGGAATTACCGCT
ACCTTCATGCTGGAGCTCAAGCTTCTGGCTGATCTGGGTCTGGTAGGACTGCCTAACGCA
GGCAAGAGCACTCTTCTGGGCGCTATTTCGCGTGCCTCGCCTCGAGTAGGCCACTGGGAG
TTCACCACTCTGCATCCCACCATTGGTACCATCTCTGTGGGCATGGACAAGCCCTCATTT
ACCGTGGCTGATATCCCTGGTATCATCAAGGGAGCTCGAATCAACAAGGGTATGGGTCTG
GACTTTCTGCGGCACGTCGAGCGATCCAATGGTCTCGTCTTCGTCATTGCTCTTGACAGA
CCGGACCCTGTTTCTGACCTCAGAGTGCTCATTGGCGAGCTGGGCCCCGAGCGAATGGCC
GGCAAGAGTGTCTTGGTGGTGGCTACAAAGGCGGACGTGGAAGAGTCCGAACGACGATTC
ATCGATCTTAACGCCTTTGTGTCTAACAAAAACTGGGCCATTGTGCCTTGTTCGGCCATG
AACGCCGAAAATGTGCAGCCCGTGATCAATGAGATGGCCAAGGTGGCCGGTGTCTACGGA
ACTAACACTATTTTGGAGGGATGATCTTGTATATATTAAATTAATTATTGACTGTTGAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04697g_CDS-001

Protein length: 528 aa.
Product: GTPase, putative

>YALI0D04697g_CDS-001 MLTSRTPGVGRLRLPLVFSRDYHKKRRQMKQKDLEKESRQDAVQRFFDKDQKRFAVMPYK
SPYDAVKYHEAQQAVKDGSHFLDVRLVKCSAGKGGNGRVSFAREAMMPYGPADGGDGGEG
GSVYIQAVDSIRTLKNLSFKYMAGAGKAGGSSHMYGHRGTDVLLQVPVGTVVKWCPDPKR
DVEQDLIKVDPEEAARKYPPQFLENGEPVPDHKEVVGVEVAEGMFHMNRGYLRLNRATMA
DGEGWTYENPQVANWCNDPKNPPEFFTRTKEATKFDDAVLRSTEEATDVFPVDGLDLCEP
GKPPQLLLKGGAGGAGNMRYHRDDIRNPKFAKLGRSGITATFMLELKLLADLGLVGLPNA
GKSTLLGAISRASPRVGHWEFTTLHPTIGTISVGMDKPSFTVADIPGIIKGARINKGMGL
DFLRHVERSNGLVFVIALDRPDPVSDLRVLIGELGPERMAGKSVLVVATKADVEESERRF
IDLNAFVSNKNWAIVPCSAMNAENVQPVINEMAKVAGVYGTNTILEG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG