YALI0D04290g

Overview

Description weakly similar to uniprot|P40990 Saccharomyces cerevisiae YDL107w MSS2 ser/thr protein kinase
Locus type CDS
Locus tag YALI0D04290g

Location

Species Yarrowia lipolytica Positions 535590..536739
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1150 (nuc.)
Previous locus YALI0D04268g Next locus YALI0D04312g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04290g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04290gYALI0D04290g_mRNA-001YALI0D04290g_CDS-001

Nucleotide sequence

 

>YALI0D04290g
ATGTCTTCTGAATCGAAGACAAGGCCGCCTCTTGAGGAAGTACTGCCGAAAAAAAATACC
CTAAGAAACTACCTGTTTCAACACAAGGTGCCATTGAGTTATGCTGATGTCATGAAGACA
TACCAGAGCTGCTACGACGACACTAGCGTTCCCAAAAAGGTGACAGGACAGGATCTGCTG
AGTCTGCAAAAGATTCTGGCATCCCACAGAAAGCAGACCCGCACAATCAGTCCCCATGGA
CTCGCCCTGGAACACAGTGTACTGGAAACAGCTGCGGAGATGGGCAATCATATGGCTATC
GCTACTTTGGCCGGTGAGATTCTTACTGCTACTGCTAAATACGAGCAGGCCAAGGCATCT
GGTAATTTGGACTCGGCTGTAGACCTCGAGTACTCTCCTGAAGATATTGAGCATGCCCAG
AAATTGCTGATGGAACTTAGTAAAAATGAGTTTCCTCTGGCCTTAAAGATCTCCGGCGAC
GTGGCGTTCCTTGTCGGCAAAGTGGACAAGGCTGCCGAGCTGTATTCCAAGTGTGCCGAA
CTTCTGGCTGGCGACTCTTCAGCGGTGGCTGCTTCCACACAGGCCGAATGTTTCCGAGGC
ATTGGAATCGTGGCCTTCCAGAACTACGAGCTGGCGGAGGCCCGACTGGCGTTTGACAAT
TGCATTTCCATGGGAGGAGCCAAGGATCATCCAGACGTGCATTTCTATCTGGGCCAAATG
GCGTCTGAAGTTAGTGACTACCCTCGGGCGCGATTCCACTACCGAGAGGCCGCTAGTAAG
GGGTTTTTCGACAGTTTTGCTCCTCTGGGCAACCTGGAGCTGTATTATTTTGACGATGTG
ACCATGGCTGGCCACTGGTTTGGACTGGGAGCCGAAATGAACGAACCCAGCTGTCTGGCT
GGACTGTTTGACGTGTCTATGAGGAAGAAGGAGTATAGCAAGGCAGAGGGGTACAAGGAG
CGTATCTTTGCTGGCAACGCTGAGTTTGTGCGGAGCTTCAAGCAGTCTCGAGACGACCTG
TTGAAGGAGCTAGAGGTTTATGAGAAGAAACAGAGTGAACAAGACAAGGAGATGACTGGT
GGTGATTTGTGGAAGTAGGAGAGGGGGCTGAAGGGTTGAATGTATATATAATCAAGGATA
TGAAGGAATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04290g_CDS-001

Protein length: 366 aa.
Product: Conserved hypothetical protein

>YALI0D04290g_CDS-001 MSSESKTRPPLEEVLPKKNTLRNYLFQHKVPLSYADVMKTYQSCYDDTSVPKKVTGQDLL
SLQKILASHRKQTRTISPHGLALEHSVLETAAEMGNHMAIATLAGEILTATAKYEQAKAS
GNLDSAVDLEYSPEDIEHAQKLLMELSKNEFPLALKISGDVAFLVGKVDKAAELYSKCAE
LLAGDSSAVAASTQAECFRGIGIVAFQNYELAEARLAFDNCISMGGAKDHPDVHFYLGQM
ASEVSDYPRARFHYREAASKGFFDSFAPLGNLELYYFDDVTMAGHWFGLGAEMNEPSCLA
GLFDVSMRKKEYSKAEGYKERIFAGNAEFVRSFKQSRDDLLKELEVYEKKQSEQDKEMTG
GDLWK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG