YALI0C07843g

Overview

Description similar to uniprot|Q872S8 Neurospora crassa B8B8.060 Hypothetical protein
Locus type CDS
Locus tag YALI0C07843g

Location

Species Yarrowia lipolytica Positions 1039407..1041912
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2506 (nuc.)
Previous locus YALI0C07821g Next locus YALI0C07854t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07843g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07843gYALI0C07843g_mRNA-001YALI0C07843g_CDS-001

Nucleotide sequence

 

>YALI0C07843g
ATGTCTGCACCATTGGATCCTGTGTTTGACCCCTGGGGTGGCGGAGGAGGCGCGAATGCT
GCTGTGGCGGCTCCGCTACCGCCTCTTTCTTCAGCTCCAGCTCCACAAAAAGGCACAGAC
ACGGAAACATACAAAGAGATGGTCAGCGTTAAGGAACATCTGGCTCGTCTGGAATTGGAC
TCGGAGGAGATTGTGGAGGACGAGGAGCTGACTGCCAGCGATAAGTCGGAGCAGCTGCAG
CTTCTGCTGTTTTCTGCGTCCAGCAACGGCAATTTGGACGCCACTCGCGACCTTCTGGAC
AAGCGTGATCAGTACGGAATCGATATGGACGCCACCGACGACAATGGCAATAGCGCGCTC
AACTACGCCGCGTGTTTTGGCCACGACAAGATTGTGCAGGAATTAATAGCCTATGGGGCG
AATGTGGAAACCGAAGACAAGTTCTCGTACACACCGCTAATGTGGGCCATTCAGAATGGG
CATTTCAACATTGTACGGGATCTGCTGGACGCCGGAGCAGACCCAGCCAAAAACACAGGG
TGTGGAAAAAACGCCCTTGGGTTTGTGACCGACGGGTCTACTATCCACCTGTATCTCAAG
GGAAGAGGCCTGATGGACGATAGCAACGAAAGTGGCGACTTTTACCAGTCGGGTATCATG
GGCGCAGAAGTGGCGACCGACGAGATTGTCATGGAGTCGGCATACAACTTTGACGTGCGG
CTGGACAAGCTGCAGGGCGACAGTGATGAGGAGAAGGACGACGACGATGACGACGGATTA
GACGCCATGGAGGACTCCTTCAGTGACACATTCAACTGGTCGCGGTGTCTGCCGGACCAA
ATGTTTGTCTTCTCCACTAAGGACATTCCCCAGATCCTCGACATAGTCATCACCAACATC
GAGCCCCAGAGAAACCATACACAGAAGCCCATTCCAGCGAACATGCTCTTTTTGTGTGCC
CGGTACGCGCATTACACTCTAGACAACAAGGATGTGGTCGCAGCAGTCATGAACCCTGCT
ATCGGACGAATCAAGGCCAAGGTGGAGGCTAAGGCTACGGATATGGTGACTCTGGCCTTT
TGGCTCTCTAATGCATCTCTGTTGCTGTACTATTTCCGACGAGACGCAGAGCTGCAAAAG
GTGGAATACACCAAGACACAGGCCGATCTGGCTTCACTGTGCAACGACATTCATGTTTTG
ATTTGCCAGGATTGCGAGCGACGTCTGGAGCCCCTTTTGGACACTTGCATTTTGGATCAT
GAGACCATCCCCGGTCTGGACGCGATCAACTACAAACACGAGTGGAAGCTCTTCAAGAAA
AAGCACAAAGAGAAAAGTCATCAGGAGGAGATGGAGGAGCAGATGCGTCCACTTTCCCCA
CATAGAAAGGCGCTGCCAAGTCCACGCAACGTGACGTCAATTCTGTCTTCCGTGCTCTTT
ATTCTTGACCTGTTTGAGATCCATCCCATTCTGACTCAGCAGATTGTTTCTCAGCTGCTG
TTTTGGCTGGGCGCTGTGCTGTTCAATCGAGTGCTGACTAACCGGCGGTACCTGTCTCGA
TCACGTGCCATGCAAGTGCGTCTTAACGTGTCTGCTATCGAGGACTGGGCTCGTCAGAAT
GACCGCAAGTACGAGATGGTGGATGAGTTTGGTAACGGAAAGATCTATCCTTCCATTTCC
GAGCTCTGTCGAAAGCATCTGGCATCACTGGTGCAGATGCTGCAGTGGCTGCAGTGTTTC
ACTGGCTTTGGAGACGATTTCACCAACGTCATTGCTACTCTACAACAGCTTACTGCTCTC
AACCCATTCCAGTTGTTGCATGTGGCTAAAAAGTACAGACCCGAGGTGGACGAGAACGGA
CTGTCAAAGGACTACAAAAAGTACCTGCAAGAGCTTGCGGAGTCGTTCAAGCGTCGGGTC
GAGAACAGAGACGTGCTCAAGGCTATCAAGAGTCACGATAGCGCCAAGAGCGCCAAGACT
GCCAAGTCGGTAAAGTCTACAAAGTCGGAGGACCCCAAGGAGGGCAAGGAGAGCGGTGAT
GGTGCACGAGCTGAAGGTGATGCGTTCGAAGCCACCCCTCCTCCGCCCCAGAACCCTGCT
GGACTCACAAACACGTCACAGTTGCCTCCAGAGTACTATGAGAATGACGATGGCAGCGAG
CCCAACCTACTGCTGGATCCTACGCAGTTGCTACCCTTCTTGCTGCCTTCGTTGGCTGAG
ATGATTATAACATGGGGTGCTGTGGGCGGCCTTCGTCGAAAGCGGGCTCGACGGTATGAG
CCTGTTCTTCCCGTCGAGTTTTTGGACTCGCTGGACTTTGGCGATGATGTTGGAGGAGGA
ATGGACGACCGAGACCACATGTTCAGTGTGTCAGAGCCACAGATGACGTCGGCTCGAGGC
TGGGAGAAGGACAACAAGGATGAGGTGACCAAGGAGAACGATGAGTTTAACCCAAAGTGG
TAGATAGCTGTGGTAATTAGCATAATGAAGTTGATAATAGCGCGCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07843g_CDS-001

Protein length: 821 aa.
Product: Conserved hypothetical protein

>YALI0C07843g_CDS-001 MSAPLDPVFDPWGGGGGANAAVAAPLPPLSSAPAPQKGTDTETYKEMVSVKEHLARLELD
SEEIVEDEELTASDKSEQLQLLLFSASSNGNLDATRDLLDKRDQYGIDMDATDDNGNSAL
NYAACFGHDKIVQELIAYGANVETEDKFSYTPLMWAIQNGHFNIVRDLLDAGADPAKNTG
CGKNALGFVTDGSTIHLYLKGRGLMDDSNESGDFYQSGIMGAEVATDEIVMESAYNFDVR
LDKLQGDSDEEKDDDDDDGLDAMEDSFSDTFNWSRCLPDQMFVFSTKDIPQILDIVITNI
EPQRNHTQKPIPANMLFLCARYAHYTLDNKDVVAAVMNPAIGRIKAKVEAKATDMVTLAF
WLSNASLLLYYFRRDAELQKVEYTKTQADLASLCNDIHVLICQDCERRLEPLLDTCILDH
ETIPGLDAINYKHEWKLFKKKHKEKSHQEEMEEQMRPLSPHRKALPSPRNVTSILSSVLF
ILDLFEIHPILTQQIVSQLLFWLGAVLFNRVLTNRRYLSRSRAMQVRLNVSAIEDWARQN
DRKYEMVDEFGNGKIYPSISELCRKHLASLVQMLQWLQCFTGFGDDFTNVIATLQQLTAL
NPFQLLHVAKKYRPEVDENGLSKDYKKYLQELAESFKRRVENRDVLKAIKSHDSAKSAKT
AKSVKSTKSEDPKEGKESGDGARAEGDAFEATPPPPQNPAGLTNTSQLPPEYYENDDGSE
PNLLLDPTQLLPFLLPSLAEMIITWGAVGGLRRKRARRYEPVLPVEFLDSLDFGDDVGGG
MDDRDHMFSVSEPQMTSARGWEKDNKDEVTKENDEFNPKW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG