YALI0C07821g

Overview

Description weakly similar to uniprot|Q9C2Q2 Neurospora crassa Related to transcription activator amyR
Locus type CDS
Locus tag YALI0C07821g

Location

Species Yarrowia lipolytica Positions 1034128..1035915
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1788 (nuc.)
Previous locus YALI0C07789t Next locus YALI0C07843g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07821g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07821gYALI0C07821g_mRNA-001YALI0C07821g_CDS-001

Nucleotide sequence

 

>YALI0C07821g
ATGCGAGCTTGCGACTGCTGCCGAGCGAGAAAGGTCAAATGCGATAGCCAACTGCCGTGT
AAAGGATGCGTCACCTCCAAACTCACGTGTACCTACAACCACGTTCCCCGTAAAAAGGGC
CCCAAGGTCGGAGGCAAGAGCGCCAGCATTCTCAACAAACTGAGACTGGGTCTGGATCAG
GCCGATCCCACCGCCCCAGAGAAGCTCTCTTGGAATGTAGTCTCCCGGCCGCTCATGGAC
CGTGCTCTCAAGCACTACTTTGCCAACTACTATCCAGTCACCCCCGTGTTGGATGAGGCG
GAGGTCTACTCCTACCTCACTCGGGAGCCCACATCGGAAACCTTTGCTTTGGTCATGTCG
ATAGTGGCCATGGCCATGGGGGATATGCTTGATCTGGAGATGACAACGCCTTCGTCAAGA
ACCCAGAACGTGCTGCAGATTGTGCGAATCGTCTGCGATGCCGTCCATGCCGAGGAAACG
GCACTGCTGACTAGCGGGGATCATAGACAGTTGGCTAATCAGACCATCACAGTTAACTCC
ATTATTACCCAATTCAACCTTTACGGCACCTTTTGCCAATTGGAAATGCCATCTCGCGCC
TTCCATTATCTTAGACAGGCCATTTCCGCGGCCCAAACTGCAGGAATAGATAGAGAGGAC
TTTTACAAAAACGACCCCGTCATCCTGGAGCCCTTCCGCACCATGTTCTGGTGTCTCTAT
GTTTCTGAACGAGGATTTGCATTACAACACAACTACCCGGCAGCCCTAGGCCAAGACCTG
CCTCTCTACCCTCAGTCAGAAGGAGAGGTGTTTGTTGGTCTCACTCAACTGGTAAAGTCC
TTCTCCGTCTTCTCTCCAACCTTCTTCAAGTTGTGGAGAGACGGAAACGCAGCTTCCAGC
CCAGCCGGATCTCCAAATACTAACCCTCAACATACCCAGACTGTCCAGCGACTGTTGCAG
TACCATCATGCCAACCAGGCCAGTCCTCTGATTCCCTGCTCGCCTGTGCAACGATCCGAC
ATTCTTATCACCGATCAGTGGATCCGCCTTCTGCTTTGGCGTCTGGCTCCCTACGGGGTC
CAGCAACCTGCAGATATCGCCAAAAATGTGGTCGCTATTGCCGACTCTGTTCCCATCCAG
ACCATCCAGGCCCATGGAGCAGGCATGATGCTCAAGATCTATGACATTGGTATGACAGTT
GCTACAGTGTTCCAGACTGCTGCTCACGCGGAACAGTTTGGTATCCCGGCACATTTGCAT
CGAATTCTCATGCTCATGTCGCAATTACAGACCTCTCAGCACCTCAGTGTACTGCTACAG
GCTGCACAGCGACTGCTGCCAAAACTGGTGCCGGATCGAGTTATCAAAAACGAAGAGTCC
TCGTCGGACAATACTACTAACAGTGGACTGATAGACTACGGAGGAGCAAGGCTGAACACC
GGGGTGGGCAGTGACGCCGAGAGCGGCTCGTCCAACAGCCCCATTGATGGGCTGGGCGGG
TTTTCTTCAAACAGGCCCATCTACCCTACCCCTCCTATCAATGGAAACTCCACACCGCAG
GGCTTAGCTGCACCAGCACCGTTGCCTCACCCTCACCCGGGGTCGTATCCACCTCCAGTA
GGCACTCTACATGGTCCTGGAACTACAACGGTAGGTCTGATGAATGAGCCTTACCCCCGT
CCCAGCCCAAACCACTCACAACAACCACTCTCCCAATCTCCACGCATCAACGTCCATCCC
AACATGGTTCCTGAGGGACCGCCGCCAAGTGAGTTCTTCCCTTGGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07821g_CDS-001

Protein length: 596 aa.
Product: Conserved hypothetical protein

>YALI0C07821g_CDS-001 MRACDCCRARKVKCDSQLPCKGCVTSKLTCTYNHVPRKKGPKVGGKSASILNKLRLGLDQ
ADPTAPEKLSWNVVSRPLMDRALKHYFANYYPVTPVLDEAEVYSYLTREPTSETFALVMS
IVAMAMGDMLDLEMTTPSSRTQNVLQIVRIVCDAVHAEETALLTSGDHRQLANQTITVNS
IITQFNLYGTFCQLEMPSRAFHYLRQAISAAQTAGIDREDFYKNDPVILEPFRTMFWCLY
VSERGFALQHNYPAALGQDLPLYPQSEGEVFVGLTQLVKSFSVFSPTFFKLWRDGNAASS
PAGSPNTNPQHTQTVQRLLQYHHANQASPLIPCSPVQRSDILITDQWIRLLLWRLAPYGV
QQPADIAKNVVAIADSVPIQTIQAHGAGMMLKIYDIGMTVATVFQTAAHAEQFGIPAHLH
RILMLMSQLQTSQHLSVLLQAAQRLLPKLVPDRVIKNEESSSDNTTNSGLIDYGGARLNT
GVGSDAESGSSNSPIDGLGGFSSNRPIYPTPPINGNSTPQGLAAPAPLPHPHPGSYPPPV
GTLHGPGTTTVGLMNEPYPRPSPNHSQQPLSQSPRINVHPNMVPEGPPPSEFFPW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG