YALI0C07777g

Overview

Description weakly similar to refseq|WP_028000838.1 Sinorhizobium arboris hypothetical protein
Locus type CDS
Locus tag YALI0C07777g

Location

Species Yarrowia lipolytica Positions 1027549..1029466
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1918 (nuc.)
Previous locus YALI0C07744g Next locus YALI0C07789t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07777g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07777gYALI0C07777g_mRNA-001YALI0C07777g_CDS-001

Nucleotide sequence

 

>YALI0C07777g
ATGAAAGTCACCGAGATCCGGAAACGGCAGTTTGAGGGTAACAACTACACAGTACACGAT
CTCGTGATCACAGGCACGTGCTCTCCCGAAACCGACACGCTGGAGGGTCTTGATTCCGAG
GCCGTGGAGTACTCGGTAGATGCTCGGTTACTGGTTCCGAAATCACACTTTTCAGGTACA
CTTTTTGCCGAGGTGCCCAATCGAGGCACAGGATCGATTGATGAAGACGCTGCCAACACG
ACGGTGGCTGGTATGAACAAGGCCAAGCGGGGCCGGGGCGGATTTGTGGATTTGGCGCCT
CTTATGAAGGCTGGTCATGCCGTTCTCAACCTCGGATGGCAGAATGATGTACCTTTGGCT
GCTGGAAAGGGCTTCAAGCTGGGAAGTCGGTTTCCCGTGGCAACCAAGGATGGCAAACCT
ATCCAGCGGTATGTTCGTCAGGAGGTGAATGCTGCTTCTCGGTTTTTTGGAGCGTCTCGA
ACGTTTCCTGTGAATGGTCTGATTGATCTAGACTACAATTTGGCAGATAACGACTCTGTG
AGGGTGTTTATGCGTCGGTTTGAAGAGGATAAGGGCGTCGAACTGCCTGCAGCAGCAGTG
ATTGTTTTGGGAAAGCGTCAGGTCAGGATCGTGTCTTCTACCCCTGTTCCTGAATCAGCC
ATTTTCGACATCCACTACCTCGCCACAGACGCCACAGTGTCTGGATTGGGCCTGGTGGCT
TACAGAGATGTGCTTTCGTATGTCAAGTCCGGCAAGTTTGACGTGATCTCGCCTCGACAC
GTTGTTGCTTTCGGAGTCTCCCAAAGTGCTCGTTTTCTGCGGACCTTTCTCTACCACGGC
TTCAACGCCGACCTGGGAGGCCTGAGAGTGCTCGATGGAGTTGTCAACTACATTGCTGGA
GCTCGAAGGGGCGACTTTACTGGGATTTTTAACAACGCTGGCGCTGTATCCACTCAACAG
TTCAATAAGCGAATCGGAGACAATAACTTTCCTTTTGCTTACGCCACAAGCACAGACGCT
ATTACGGGCAAGACGGACGGTATTCTACACAAGTACCCACCTCTACTGCAGCCCAAAATC
ATCCATGTTGATACTGATAACGATATGAGTGCTGGATTCGGATGGTTATGTACCACCCAA
ACCGACGGTAAGACCCCTGTTGACGAGCTGGATAACGTACGACATTACTTCCTGGCCGGA
TTGCAACACATTCCGTTTTTCAAACCCATCATTCCAGGAAAACGGTCCTCTAAGGGCTCC
TCTGGTGTCACTCTTCACTACAACACCTTTCTCAAGGCGTCTCTCTTGACAATGGCTGAC
TGGGTGGATGCTATCAAACTACCTCCCATGTCCCGGTATCCCACCTTGGCTGACGATTCT
CTTGTTTCCCTGGCGGTTGCTCAACGTCTCTGGCCTCATATTGAAGGGGTTCCCTACTCT
TCCGTTCGAAACGTGCCTTGTCATATCATCGAAACCGTCTCCAAGGACGTGGTTGTTCCT
GCTGTGGTTGAAACATACCCCGTACTTACCCCTCCCGTCAACTCTGATGGAAACGAGACC
TGTGGGGTTGTTCATCCTGCTATTCAGGTTCCTCTGGGAACATATTCAGGCCACTCTGTG
GCTCGAAATGGTATCCAGACCTTCCTTGAGGGAGAATTCATACCCTTCAAGACCACTCGA
GCCGAACGGTATGATGGATCTCGACTCATTGACTCTCGTCTAAGTGTAGAGGAACGTTAC
TCTGCCAGCTCTTATGCCACCCAGATTACTGCCGCTGCCAAGAAGCTCGTCAAGGAGGGT
TTCCTGTTGGAGGAAGACATTCCCACTGTCACCAAGTTCGACAAGCGAGCCTTTGGTCCG
GTTTCCAAGCTGTAGTTATATATATTAACGGGATTACCAAATCCGAACACTGTTGTAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07777g_CDS-001

Protein length: 625 aa.
Product: Hypothetical protein

>YALI0C07777g_CDS-001 MKVTEIRKRQFEGNNYTVHDLVITGTCSPETDTLEGLDSEAVEYSVDARLLVPKSHFSGT
LFAEVPNRGTGSIDEDAANTTVAGMNKAKRGRGGFVDLAPLMKAGHAVLNLGWQNDVPLA
AGKGFKLGSRFPVATKDGKPIQRYVRQEVNAASRFFGASRTFPVNGLIDLDYNLADNDSV
RVFMRRFEEDKGVELPAAAVIVLGKRQVRIVSSTPVPESAIFDIHYLATDATVSGLGLVA
YRDVLSYVKSGKFDVISPRHVVAFGVSQSARFLRTFLYHGFNADLGGLRVLDGVVNYIAG
ARRGDFTGIFNNAGAVSTQQFNKRIGDNNFPFAYATSTDAITGKTDGILHKYPPLLQPKI
IHVDTDNDMSAGFGWLCTTQTDGKTPVDELDNVRHYFLAGLQHIPFFKPIIPGKRSSKGS
SGVTLHYNTFLKASLLTMADWVDAIKLPPMSRYPTLADDSLVSLAVAQRLWPHIEGVPYS
SVRNVPCHIIETVSKDVVVPAVVETYPVLTPPVNSDGNETCGVVHPAIQVPLGTYSGHSV
ARNGIQTFLEGEFIPFKTTRAERYDGSRLIDSRLSVEERYSASSYATQITAAAKKLVKEG
FLLEEDIPTVTKFDKRAFGPVSKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG