YALI0C07744g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C07744g

Location

Species Yarrowia lipolytica Positions 1025159..1026760
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1602 (nuc.)
Previous locus YALI0C07722g Next locus YALI0C07777g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07744g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07744gYALI0C07744g_mRNA-001YALI0C07744g_CDS-001

Nucleotide sequence

 

>YALI0C07744g
ATGCAACAACAAATCAACAAGTGCATTAACGAAATCGCCTCGCTGGCCAACCTCAGCCCT
GAGTCTTCCCTGACCACAGCCACATCGCTGCTCCCCAGCCCAGGTCACAAAGTTGCCTTT
GTCGTGCTCTGCACGCTCCAGCTGTCTTTGTGTCTCTACACTGCCTTCTTCCTCTCCAAG
CGTCGAGGCACCATTAAGGACCTCCATTACGACGTCAAAGACGTCACCGAGTCCGTCGAG
GAAGCATACTATCTCATCAACGAGCTCAACTCCCGTGTGGCCCAGAGCACCAAAGAGCAG
CCGCAGTCACCCACCGGGGTGCTCGACAAACACAAGGAGCAATTGGTCGCGAACGTGTTG
TCCAAGATGGAAGACAAGTTAACGCACCCAATCGAAGCCATCAAAACTCGTCTCACCGCT
CTCGAGAACAATCTTGCTAGTCTTCAGCGGGCCAATTCCAACTTCAACCCGCGCGCTCCT
CCTTATCGTGGTGGAGGCAAGCTCACCCGAGACCCGCGCGGCAACGAAAACTACCGCCAC
GGCAACGGTGGCGGGGACTTTCGTTCCTTTGATTCTCGAAACGACTCCCGCTTCAATGAG
TCAAACTACTCTCTCGATTCTCGTCCCTGGAAGCCCTGGAACCGCACCGGTGGACGATCA
TATGCCAACTCCACCCCTACCTCTGCTCCCATCGAATTTTACGGGGAGAAGCGCTCTTTT
GAGAAAATGGAGTGGGCAGATAAGCACAATGTGGCCAGTCCCGTTGTCACTTCCGTTGTC
GAGCCCACCGCTGAGGTTATCCAGCCGGTTGCTCGTCCCGTCTCGGCGGTTCCAGTGCCT
ACCACCATCACTGGAGCTCCGTCACCTGCCACTCAGTCTGTCCCAAAGCTGGTGGTGAAC
TGCACGCCCCAGCAGAGCAAAAAGATCATCATCAAGGCTGGGGACCGGGAGTACGATCTG
GCGAGTGCTGAGGGCCGTGAGCAATGGAGCTCTGTTGCCAAGCGTAACATTGCCAAGGCC
ATCACACTCCCCAGCCATGTACAGGTGCAAGATATTGCTCCACCTCCCCTGGCTCCTTTG
CGAACAGCCAACACTCGGCCCCACACCATTGAGCTGTCACCTTTGACTTCCACCTATTCC
TCTGAGACTGATGGCACCGAGGCTAGCAAGGCCTCGAAGCCCAAAGAGGGAGGTGTCACG
CAGGAGGAGCGGCGCGCTGGTGGGCTCGATAATTACATCGAGTCCGTGGGTTCGCCGCAG
AGTCCCAACGCCTCCCTGAGTCGAGGACTACAGCTCAAGCTCGAGGAGAATGTCTCCAAG
AAGGAGAGCAGCGGCAGCATTGGCGATGCTTCCAACGGCGGTGTTGGCGGTGTTGGCGGT
GTTGGCGGTGTTGGCGGTGTTAGCGGTGACGGTGAGAAGAAGCCCTACCGGCGGCTGTTT
ATCCCCGGCCGAGGTTGGGTGTCAGCTCGTCGTATTGCTATGGAGAAGGCCCAAGAGCAA
GGGGGAGAAATCACCGGGTGCGACCGCCGAGACCTTGGCGCGTCTGCTTCCGATACTGAT
GTTCAGCCTCCTGTTGGCGAGAACACTGCTGTAGCTGCTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07744g_CDS-001

Protein length: 534 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C07744g_CDS-001 MQQQINKCINEIASLANLSPESSLTTATSLLPSPGHKVAFVVLCTLQLSLCLYTAFFLSK
RRGTIKDLHYDVKDVTESVEEAYYLINELNSRVAQSTKEQPQSPTGVLDKHKEQLVANVL
SKMEDKLTHPIEAIKTRLTALENNLASLQRANSNFNPRAPPYRGGGKLTRDPRGNENYRH
GNGGGDFRSFDSRNDSRFNESNYSLDSRPWKPWNRTGGRSYANSTPTSAPIEFYGEKRSF
EKMEWADKHNVASPVVTSVVEPTAEVIQPVARPVSAVPVPTTITGAPSPATQSVPKLVVN
CTPQQSKKIIIKAGDREYDLASAEGREQWSSVAKRNIAKAITLPSHVQVQDIAPPPLAPL
RTANTRPHTIELSPLTSTYSSETDGTEASKASKPKEGGVTQEERRAGGLDNYIESVGSPQ
SPNASLSRGLQLKLEENVSKKESSGSIGDASNGGVGGVGGVGGVGGVSGDGEKKPYRRLF
IPGRGWVSARRIAMEKAQEQGGEITGCDRRDLGASASDTDVQPPVGENTAVAA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG