YALI0C07436g - APN2

Overview

Description uniprot|Q6CCQ7 Yarrowia lipolytica YALI0C07436g APN2 DNA-(apurinic or apyrimidinic site) lyase
Locus type CDS
Gene name APN2
Locus tag YALI0C07436g

Location

Species Yarrowia lipolytica Positions 979054..980976
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1923 (nuc.)
Previous locus YALI0C07414g Next locus YALI0C07458g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07436g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07436gYALI0C07436g_mRNA-001YALI0C07436g_CDS-001

Nucleotide sequence

 

>YALI0C07436g
ATGAGATTCGTCACGTTCAACATCTGTGGCATCAACAACGTGCTGAGCTACCATCCATGG
AACGAGCAAAGGTCGTTTGAGCACATGTTTGCGGTGCTGAAGGCGGACGTGATCTGTTTA
CAAGAAACCAAGCTCCAGCCCCATTTGCTGAAGCGAGAACACGCCCTTGTGCCCGGATAC
GATTCGTACTGGTCTTTTTCCAACACAAAAAAGGGCTACAGCGGCGTGGCGGTCTATGTG
AAACATGGCATCAAAGTTCTCAAGGCCGAGGAGGGTCTTACCGGTCAGCTGGTATCTCCG
GACTCCAAAAAGGGACTCACCTACCAGCAGCTGTACGAGCGGCAAAGGGAGAGAGACGGC
AGCAGCAAGAGTTGTATCGGCGCCTATCCCGAGGGCAATCCACAGCGGCTCTTTCAGGTC
GATTCGGAGGGCCGGTCTCTCGTGTTGGACCTGGGGTTCTGTGTCGTGTTTGGGCTCTAC
TGTCCTAGCACCGCCACCGAGGGCGAGGAGCGAGATGCCTACAGAGACGACTATTTTGGG
TTGCTGGAGGAACGGGTCAACCTTCTGGTTGAGGCTGGACGAGAGGTGGTGGTCATGGGA
GATCTCAATGTGGCACGCGAGCTGTACGACTCAGCTGAGGGAATGCAAGCGCTGCACAAG
GCCAAACACATCACTCTACCGACACTGGGAGATAAGGAGGAGGGCAGGTTTGTGGAGGTG
TTTGAAAAGCTCAACCCGGGACAGTGTAAGAGCTGGAGGGAAGCCAAAGTTGGCCGACGA
GTCTTCCACAGACTGGTCCCCGACCTGTTACAGGACTCGTGCCGCAACAAGCATCCCAAT
CGACCCGACATGTATACTTGCTGGAACGTGATGATGAACTACCGGCCCGGAAACTTTGGG
TCTCGTATCGACTACGTGCTGGCCTCAAAAGGTCTGAAGGTGGAGGATGCCGATATTCTG
CCCCACCTGGAGGGCTCAGACCATTGTCCCGTTTATGCAGAGGTGCGCGAACCAGACGCG
TGCCAAGAAAAAGACAACCGTGCCACTCAAGGTGCAGCTAACCAGACCAAACAAGCGTCG
TCCTCAGCCCCAAACTCGTTTCGGCCAAAACTGTTCCACAGAACTAACAAGCAGTTTGTG
CAGACCACCTCGGTCATGTCCATGTTCCGGGCGCAAACGCCGCCGACCAAGGGCATTACC
AAACCCAAAGCGCCCTCCAAATCGACTGCCAAAAAACAGGCGGCCATCTCCTCCTTCTTC
CAAAAGCCAGATCCAGAAGCTGCCGTCGTATCAACATGCGTCTCGGATGTGCACACAAAG
CCGTTGGGACAATCACAATCACCCGCCGTGTCCCCAAATATTGAAAGCACCTATCAAGGT
TGCGATGCAGGTGCGCATGCGACTCGAGAGGGTGAAGATACGAGACCGCAAATGGCCACC
AGACTGGACTTGCCAGAGCCCACCGAGTACCTAGACATTGCGGAGCGCGTGGAGGAGGCC
GAAAAGGTCGCGTCGCAGTGGTCCAAGATCATGACAAAAAAACCAGCCCCCGTCTGTGCC
CACAACCTCCCGGCGGTGCTAAGAACCACCCGCAAAAAGGGACCCAACCAGGGCAAGCAC
TTTTGGGTTTGTGGCCAGAACCACTCGCTGCAGCTCGTCGGCGACTCCTACAAGGCATCG
GCAGACCCCGACGCCAAGGGCTCCCAGGACGACACCAGTGCCAGATGTAACTTCTTTCAA
TGGAAATGATCGAAGGTTGGCTATTGTAACAAGGAAACTGCCATTTCAGATGTTTACAAC
TGCTTTTGATATATTATACTTTTATAAAAGATGAGGATCGACAACGATAATGCACAATGA
GCCTGTTTCACCAACACTGTCATCCCATTTGGGTTAAGTCAATATCAGCGTTCCTATTAC
CTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07436g_CDS-001

Protein length: 583 aa.
Product: DNA-(apurinic or apyrimidinic site) lyase
Gene: APN2

>YALI0C07436g_CDS-001 MRFVTFNICGINNVLSYHPWNEQRSFEHMFAVLKADVICLQETKLQPHLLKREHALVPGY
DSYWSFSNTKKGYSGVAVYVKHGIKVLKAEEGLTGQLVSPDSKKGLTYQQLYERQRERDG
SSKSCIGAYPEGNPQRLFQVDSEGRSLVLDLGFCVVFGLYCPSTATEGEERDAYRDDYFG
LLEERVNLLVEAGREVVVMGDLNVARELYDSAEGMQALHKAKHITLPTLGDKEEGRFVEV
FEKLNPGQCKSWREAKVGRRVFHRLVPDLLQDSCRNKHPNRPDMYTCWNVMMNYRPGNFG
SRIDYVLASKGLKVEDADILPHLEGSDHCPVYAEVREPDACQEKDNRATQGAANQTKQAS
SSAPNSFRPKLFHRTNKQFVQTTSVMSMFRAQTPPTKGITKPKAPSKSTAKKQAAISSFF
QKPDPEAAVVSTCVSDVHTKPLGQSQSPAVSPNIESTYQGCDAGAHATREGEDTRPQMAT
RLDLPEPTEYLDIAERVEEAEKVASQWSKIMTKKPAPVCAHNLPAVLRTTRKKGPNQGKH
FWVCGQNHSLQLVGDSYKASADPDAKGSQDDTSARCNFFQWK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG