YALI0C07414g

Overview

Description similar to uniprot|Q9P7B4 Schizosaccharomyces pombe Putative short chain dehydrogenase
Locus type CDS
Locus tag YALI0C07414g

Location

Species Yarrowia lipolytica Positions 976779..977669
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 891 (nuc.)
Previous locus YALI0C07370r Next locus YALI0C07436g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07414g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07414gYALI0C07414g_mRNA-001YALI0C07414g_CDS-001

Nucleotide sequence

 

>YALI0C07414g
ATGTCTTTCGGAGATAAAGCTGCTGCTCGACTTGCGGGCAAGACCGTCTTTGTTACCGGC
GCCTCGTCCGGCATTGGCCAGGCCACTGTTCTCGCTCTAGCCGAAGCTGCCAAGGGCGAC
CTCAAGTTTGTGCTTGCTGCCCGACGAACCGACCGTCTGGACGAGCTCAAGAAGAAGCTG
GAGACCGACTACAAGGGTATCCAGGTGCTGCCTTTCAAGCTGGACGTGTCCAAGGTCGAG
GAGACCGAGAACATTGTGTCCAAGCTGCCCAAGGAGTTTTCCGAGGTGGACGTGCTTATC
AACAACGCCGGCATGGTCCACGGCACCGAAAAGGTTGGCTCCATCAACCAGAACGACATT
GAGATCATGTTCCACACAAACGTGCTCGGACTCATTTCTGTCACTCAGCAGTTTGTCGGC
GAGATGCGAAAGCGAAACAAGGGCGACATTGTCAACATTGGCTCCATCGCCGGACGAGAG
CCCTACGTTGGAGGAGGAATCTACTGTGCCACCAAGGCCGCCGTGCGATCTTTCACTGAG
ACTCTCCGAAAAGAGAACATCGACACTCGAATCCGAGTCATTGAGGTTGATCCTGGAGCC
GTTGAGACCGAGTTCTCCGTCGTGCGATTCCGAGGAGACAAGTCCAAGGCCGACGCTGTT
TACGCTGGAACCGAGCCTCTGGTCGCTGACGATATTGCCGAGTTCATCACCTACACTCTC
ACTCGACGAGAGAATGTCGTCATTGCCGATACTCTCATTTTCCCCAACCACCAGGCTTCT
CCTACTCACGTCTACCGAAAGAACTGAGATCAGGGCAAGTTATAGATTTATACAGGTAAG
ATGATGTTTTCCAAGAGCAATCTATGATACTAGACCCCCGTTTGATGAGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07414g_CDS-001

Protein length: 269 aa.
Product: Short chain dehydrogenase, putative

>YALI0C07414g_CDS-001 MSFGDKAAARLAGKTVFVTGASSGIGQATVLALAEAAKGDLKFVLAARRTDRLDELKKKL
ETDYKGIQVLPFKLDVSKVEETENIVSKLPKEFSEVDVLINNAGMVHGTEKVGSINQNDI
EIMFHTNVLGLISVTQQFVGEMRKRNKGDIVNIGSIAGREPYVGGGIYCATKAAVRSFTE
TLRKENIDTRIRVIEVDPGAVETEFSVVRFRGDKSKADAVYAGTEPLVADDIAEFITYTL
TRRENVVIADTLIFPNHQASPTHVYRKN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG