YALI0C07018g

Overview

Description similar to uniprot|Q9GP41 Echinococcus multilocularis Putative U-snRNP-associated cyclophilin (Peptidyl-prolyl cis-trans isomerase) (CPH1 cyclophilin)
Locus type CDS
Locus tag YALI0C07018g

Location

Species Yarrowia lipolytica Positions 939605..940193
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 589 (nuc.)
Previous locus YALI0C06996g Next locus YALI0C07040g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C07018g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C07018gYALI0C07018g_mRNA-001YALI0C07018g_CDS-001

Nucleotide sequence

 

>YALI0C07018g
ATGACCATCACGTTTCTGGACGTGACCTACGATGGCCAGCGCATCGGCCGCATCAAGTTC
AAGCTGTACTCGGAAGATCTGCCCAAAACATGCGAGAACTTTCGCCAGTTTTGCACCGGA
GAATACAGAATCGACAATGTTCCCCAAGGATACAAGGAGAGCACATTCCACCGAGTGGTC
AAGGGATTCATGATCCAGGGAGGCGACTTTGTGCGTGGCAACGGACTCGGAACAGTGTCC
ATCTTTGGAAGTGCCAGCTTCCCCGACGAACGAACCATCTCTGGCAAAACATTCCCGCAT
ATTGAAGGCGCTCTATCGATGGCAAATTCAGGCAAAGATACCAACGGTTGCCAGTTTTTC
ATCACAACGCGCAAATGTCCCGAACTGGACGGCTCGCACGTGGTGTTTGGACATGTGATT
GAGGGCATGGACGTGGTCAAGTTTGTGGAGAACGTGCCTGTAGTGGAAGAGAAGCCCAAG
CGAGACGTTGTCGTTAGTGAGTGTGGAGAGTACTAGTTGGGAAGCATGGAGGATATTTAA
CAAACGCATTATAGATTATTGATTTGGAATGGGACAACAGATTTATCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C07018g_CDS-001

Protein length: 172 aa.
Product: U-snRNP-associated cyclophilin (Peptidyl-prolyl cis-trans isomerase), putative

>YALI0C07018g_CDS-001 MTITFLDVTYDGQRIGRIKFKLYSEDLPKTCENFRQFCTGEYRIDNVPQGYKESTFHRVV
KGFMIQGGDFVRGNGLGTVSIFGSASFPDERTISGKTFPHIEGALSMANSGKDTNGCQFF
ITTRKCPELDGSHVVFGHVIEGMDVVKFVENVPVVEEKPKRDVVVSECGEY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG