YALI0C06952g

Overview

Description highly similar to uniprot|P32449 Saccharomyces cerevisiae YBR249C ARO4 3-deoxy-D-arabino-heptulosonate-7- phosphate (DAHP) synthase, catalyzes the first step in aromatic amino acid biosynthesis
Locus type CDS
Locus tag YALI0C06952g

Location

Species Yarrowia lipolytica Positions 930132..932587
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2456 (nuc.)
Previous locus YALI0C06930g Next locus YALI0C06963r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06952g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06952gYALI0C06952g_mRNA-001YALI0C06952g_CDS-001

Nucleotide sequence

 

>YALI0C06952g
CGATTACTATCGACACACACAAAACGACAATAATGGCCAATTCTCCTGTGAGTATGATTC
TGGTGAAGGACAAAGAAAGCAGCACAAGGGGTAGCCCAGTGGTAGTACCAGGACAGTTCG
AGACGGGGTTTCCGACATGGTGACGCCAAAATACTGATCTGTCTTTGGGTGCAGCTTTGA
AAGTGTTTGAGGTCGATTTTTCTGTCAGAGAGTCGATATCAGAGGTGGCGAGACTCTCTG
GGATTGCTGTGGTTCACGCGCTATTGATCTGAGAGGTTCTAGGTGCTTGTTTCTGGGCTC
TCTGTGCTGCTGTGTGACAGTTGTGGAGATCCACCCCTGAGCATGTTACAGAAGTGTTAT
TGAGACGAGATTTGATTTCTGAGCTTGGACGGCCAGGGCGGATCAGTTGGTGGTTTCGTG
GGCCTCCCGGCCGTTCTGGAGGGTGTTTGCTGTGCAATGTTGTGGTGCTGCACTCGACGA
GGTGTTTGACTGTTCTGTCTTCAATGAGTCTCGCGAGATATTGATGCCACACAGCGAGCG
CTGCAGAGCGTCTGAGATACGGTCGTTTGTTCTTCCCTATCAGAGATACGTGTCTCTGGT
AGACCTGACAACTCCCACAGTATACAGCGCATACACATCATGCTGTACATACAGCATATC
CCTGCAGAGTGACATTCCACAGACATCACGTCCCACTGACACTCCACCCGCCACCCTCCA
CCACCACGGTCTAAAATCTTTTTCGAGCTAGCCCTTGAAGATCTAGTCCAACGTCGTTCT
AGCGCCCCTCAAATCAATGAGTCAGACTAGAGTTTGTCACTAGGCGTGTGTTTCATTGCT
TGAGCTTGAGTGTGATTTGAGTGTGGTTTTAAGTGTGTGACTGATTCTGGTGAAAACCTG
AATTTCAACATTATGCATCATTATCGATATATGACTGTGTCTGATGGTATGGGTCAATTC
TCGTTTCATCACATTTCTGTGTCGGTACACACACCACTTCAGATCAGATCTCCAACGGAT
CATTATTACGCTCAAGAGATCGTCTGCTCATAATATGCCCAGTTCAATTCGCAAGTCTGA
GCTGACCTCGAACAGCTAACCTCGTGCTCTGAACAGCTAGAGGCATATTCTGGTGACGGA
CACGTGCCAACATGCCTCACATAATGTTCTCTTCGCTCAAACTCGTCGTGTTTTTCGCTA
ACCCAGATGTTCGGACCCGACGGCATGTCCCGTTCCTCCTCTCCCAACGCCTCCTCTGCT
GAGGACGTGCGAATTCTGGGCTACGACCCCCTCCTCGCTCCCGCTCTTCTCCAGACTGAG
GTTGCCTCCACCAAAAACGCCCGAGAGACCGTCTCCAAGGGCCGAAAGGACTCCATTGAT
GTCATCACCGGCAAGTCCGACAAGTTGCTGTGCATTGTCGGTCCCTGCTCCCTCCACGAC
CCCAAGGCCGCCATGGAGTACGCCCAGCGACTCAAGGAGCTGTCTGACAAGCTGTCTGGT
GAGCTCGTCATCGTTATGCGAGCCTACCTCGAGAAGCCCCGAACCACCGTTGGCTGGAAG
GGTCTGATCAACGACCCCGACATGGACGAGTCTTTCAACATCAACAAGGGTCTGCGACTC
TCCCGAAAGGTCTTCTGCGACCTTACCGACTTGGGTCTGCCCATTGCCTCCGAGATGCTC
GATACCATTTCTCCCCAGTTCCTGGCCGACCTGCTCTCCCTGGGTGCCATTGGTGCTCGA
ACCACCGAGTCCCAGCTGCACCGAGAGCTCGCCTCCGGTCTGTCTTTCCCCGTTGGTTTC
AAGAACGGAACCGACGGTACTCTGGGTGTTGCCGTTGATGCTGTCCAGGCCGCCTCTCAC
CCTCACCACTTCATGGGTGTCACCAAGCAGGGTGTTGCCGCCATCACCACCACCAAGGGT
AACGAGAACTGCTTCATCATTCTGCGAGGAGGTAAGAAGGGCACCAACTACGACGCCGAG
TCCGTCGCCGAGTGCAAGAAGGCCACCGAGTCCATGCTCATGGTTGACTGCTCTCACGGC
AACTCCAACAAGGACTACCGAAACCAGCCCAAGGTTTCCAAGGCCGTTGCTGAGCAGGTT
GCTGCTGGCGAGAAGAAGATCATCGGTGTCATGATCGAGAGTAATATCCACGAGGGCAAC
CAGAAGGTCCCCAAGGAGGGCCCCTCTGCCCTTAAATACGGTGTCTCCATCACCGACGCC
TGTGTCTCTTGGGAGACCACCGTGGACATGCTCACCGAGCTGGCCAACGCCGTCAAGGAG
CGACGAAACAAGAACTAATCAATATGAGCGTGGTTCCCAGCGACGTCACTGCTTGACGGA
TGAGTCCGCTCAATACGAGCGGAGCATGTCGGTACAAGCACAGCGAGTATTGTATATATA
AGAACAGGTGAATAGTAAAATGTAAAAGTATAGTGAGTTGCAGAGCAAGTACAAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06952g_CDS-001

Protein length: 358 aa.
Product: 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, putative

>YALI0C06952g_CDS-001 MSRSSSPNASSAEDVRILGYDPLLAPALLQTEVASTKNARETVSKGRKDSIDVITGKSDK
LLCIVGPCSLHDPKAAMEYAQRLKELSDKLSGELVIVMRAYLEKPRTTVGWKGLINDPDM
DESFNINKGLRLSRKVFCDLTDLGLPIASEMLDTISPQFLADLLSLGAIGARTTESQLHR
ELASGLSFPVGFKNGTDGTLGVAVDAVQAASHPHHFMGVTKQGVAAITTTKGNENCFIIL
RGGKKGTNYDAESVAECKKATESMLMVDCSHGNSNKDYRNQPKVSKAVAEQVAAGEKKII
GVMIESNIHEGNQKVPKEGPSALKYGVSITDACVSWETTVDMLTELANAVKERRNKN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG