YALI0C06930g

Overview

Description weakly similar to uniprot|Q96VT0 Agrocybe pediades Phytase precursor (strong similarity to acid phosphatase)
Locus type CDS
Locus tag YALI0C06930g

Location

Species Yarrowia lipolytica Positions 927195..929042
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1848 (nuc.)
Previous locus YALI0C06908g Next locus YALI0C06952g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06930g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06930gYALI0C06930g_mRNA-001YALI0C06930g_CDS-001

Nucleotide sequence

 

>YALI0C06930g
ATGAGCAAGTACCGAAAACTGGAAGACCCGTCCACGTCGTCAATAGAACGAGATCTGGGC
GACGTCGGGTCCAGTCACGTGACGCCGGGCCACCCCAGCGTGACTTTTGACATGGACGAG
GATGACGGATATGATGAGCTTGGAGACTTGGGTGATCCCATGAACTTGCCTCAGGTGGAC
CAGATCCCGATACCAAAGCTGGGAGCTCGAGGCAGCGGGTCGCGTCGCAAGCTGCAGAGT
CGACGTAACAAGATTGTCGGTCTGGCTACTGCCGGAGTGACTGTTCTGCTCATTGTGCTG
TACCTGTTACTTCCCACTATTTCCGGAGAGCCAAGGAAGAGCGAACAGGGAGCTGCTGCT
CTGAGCGAGGCTCAGCACACCGGCGCGGTGTACAAAAACAAATTCCACATGCAGGAGAAC
TGGGGCAGCTTATCGCCGTTTTTCTCTGACGGCGTGTCTTTTCACGGCGTTACTGCTCGA
GAAAAAGGCCGGTTGGACCACCATGGATTTCCTCTGGTGCCTGAAATGGGCGTCTGTACT
CTGAGACAGGCTCATGTTCTTCATCGACATGGAGAGCGATACCCTACTGATGGAGCAGCA
GACAACATGGTAGCTTTTGCTGACAAGCTCAAGAGCAGCATTAACAACCAGACGGACGAG
ATGTTTGCCTGGGTTGACCACTGGAACTATCTGTTGGAGCGAGAACTGCTCGTTCCTCGG
GGATACTCTACTGAGTTTGCTGCAGGTGCTCAATTCTGGTCTTCTCACGGTCGACATTTG
TTCAATGAGGGTAGCTTGCTTGGAAAGTGGAGTCATGACCCCATTGTTATTCGAGCAACT
GAACAGGAGCGAATTCGAGACTCTGCTCAGGCCTGGAGTGAGGGTTTCTTTGCCAAAAAC
AACGATCTGTTCACGCTGTCTCTTCAGCCTGAGAAGGACGGCGAAAATGCTACTCTTGCC
AGCTACTTTTCGTGCAAAAACGCTTACAACAATCCCAAATCCGTGTCGGGCAAGCAGAAG
GAGGCCGAATGGATCGACAACTACCTGAATAAGGCCAGCTTGCGTTTCCAGGAACTGATT
CCCGGGTTTGAGAACTTCACCGCCCACGACGCATTCCAGATGCAGCAGCTATGTGCGTTC
GAAACTGCAGCTTTCGGACACTCCAAGTTCTGCGAGTTCTTCACCGAAACCGAGTGGAGA
GGCTACGAGTACGCCTCCGACCTCAAGTTCTACTACAACGACATGTTCGGAAGCAAGACT
GGTGTGGCTCAGGGAGCTGGATGGCTGAGTGAACTTGTTGCTCGTCTGGAAGGTGTTCTC
ATCACCACTCCTGCCTACGGAGTTGATGTGGGAGAGACCTCCAGCAATAAGACCTTCCCT
CTGGACCAACCTCTTTACATGGACATGTCCCATGACTCTGTCCTGTTGTCTGTTCTGACC
GCTTTGAACCTTGACTTTCTGCAAGAGTCGCTTACCCCTGACAAGATCAAGGTGCCCCGA
AACGTAATCATCTCGCGCCTGACTCCCTTTGGTGCTCGAATTACCGTCGAAGTGTTTGAT
TGTGATGCCGAGACGGAGGGTGTTTCAAGTACGTACATTCGAATTGTTCTTAACGGCCGA
ATCCTCCCTCTTTCCAGTCTCAAGCAGTGTCCCGAGAACGCCGATGGAGTGTGCGAAGTC
GGTCTGTTCATCGACTCGGTAAAGTCAGCCTTGGCAGCCATTGATTACGACAAGCTGTGC
GAGGGAGAGTTGTAGGACGGTATATACTAACGAGCCGGGGTGCCGGAGGTGTAGACGTAT
GATGATGATTTATGTATTGAATAAAAATTAATTGGCTTTGTATTGAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06930g_CDS-001

Protein length: 585 aa.
Product: Conserved hypothetical protein

>YALI0C06930g_CDS-001 MSKYRKLEDPSTSSIERDLGDVGSSHVTPGHPSVTFDMDEDDGYDELGDLGDPMNLPQVD
QIPIPKLGARGSGSRRKLQSRRNKIVGLATAGVTVLLIVLYLLLPTISGEPRKSEQGAAA
LSEAQHTGAVYKNKFHMQENWGSLSPFFSDGVSFHGVTAREKGRLDHHGFPLVPEMGVCT
LRQAHVLHRHGERYPTDGAADNMVAFADKLKSSINNQTDEMFAWVDHWNYLLERELLVPR
GYSTEFAAGAQFWSSHGRHLFNEGSLLGKWSHDPIVIRATEQERIRDSAQAWSEGFFAKN
NDLFTLSLQPEKDGENATLASYFSCKNAYNNPKSVSGKQKEAEWIDNYLNKASLRFQELI
PGFENFTAHDAFQMQQLCAFETAAFGHSKFCEFFTETEWRGYEYASDLKFYYNDMFGSKT
GVAQGAGWLSELVARLEGVLITTPAYGVDVGETSSNKTFPLDQPLYMDMSHDSVLLSVLT
ALNLDFLQESLTPDKIKVPRNVIISRLTPFGARITVEVFDCDAETEGVSSTYIRIVLNGR
ILPLSSLKQCPENADGVCEVGLFIDSVKSALAAIDYDKLCEGEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG