YALI0C06512g

Overview

Description weakly similar to uniprot|P39709 Saccharomyces cerevisiae YAL067c SEO1 suppressor of sulfoxyde ethionine resistance
Locus type CDS
Locus tag YALI0C06512g

Location

Species Yarrowia lipolytica Positions 873922..875475
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1554 (nuc.)
Previous locus YALI0C06490g Next locus YALI0C06534g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06512g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06512gYALI0C06512g_mRNA-001YALI0C06512g_CDS-001

Nucleotide sequence

 

>YALI0C06512g
ATGAGCTCTCATACTAATCACGATGTTATCAGTCTCAGCGATTGGAGTGACACCAAGCTC
GACAAGAGGGATCATATCATTGCAGTGAAAGAGGCTAATGATTTGGAGGTGGTTGAAGTG
ATAGAAGTTGGTGAGGTGGGCGATGTTTCGTCAGCCGACTACTCAGTGATCACATCCCGG
TCCAAACCAAACAAGACGTGGAAAACACTGCTATGGGACTCGGCAAACAAAAGTCCTGGA
GAGAAACATCTATTAATAAAACTGGACTGGTTTCTCTTGTCGTCGGTGATGCTAGGTTAC
TTCATCAAGACCCTCAATCAGAACAATATCAACACCGCCTACATGAACGGCATGAAGGAA
GACTATGGCATGAGCGGCAGCCAGCTCAACTACCTCCAGACAGTCTGGATTGTGGGATAC
ATTGTTGGCCAAGTTCCAAGTAACCAGATTCTACAGAGAACAAGTGCACGTTACTACCTG
GGATGCTTGGAACTCGTGTGGATGGCTCTGACATTTCTGACACTCACATGCACCAATATC
AAGTCTCTCTACGCTCTGAGATTCTTTGTGGGGCTCACCGAAAGCGGGTTCTTTCCTGGA
GTCGAGTACCTGCTCGGATCATGGTACAATAAAGACGAACTCACCAAGAGGTCTGCTCTA
TTTGCAGTCTCTGGTATCGCAGCTTCCATGGTCACAGGATACCTCCAGGCGGCCGTTATA
CATGGTCTAGAACACACCGCTATCACTCCCTGGAAGTGGCTCTTTGTGTTTGATGGTATC
ATTTCATTTCCAGTGGCACTTTACACCATGTTCGTCAACCCAAACACACCGGAGACAACT
ACCAGCTGGTACTTCACCAAGGAAGACATTGCTATAGCCAAGGAGAGAAGAGCACAAATC
GGCGATACCGGTAACAAAGAAGAGCCGTTCTTGCAAGTTTTGAAACGCTCTTTGAAAACC
TGGCACATTTATTTCTTCTCTCTCATCTTTCTTTGCTACAATAACACCTGTATTGCCAGC
ACCCAACCTTCCATGATCTCCTGGCTCAAGTCTCAAGGATACACACCTACCCAATATAAC
GTGTACCCCTCGGCAGTTGGCAGGGTTGGAATAGGAGTGACTCTGATCATGGCTGTGGTT
TCGGACGCTTTTGGAGGTCTCAACTACCCGTTTGTTGCAGCCTACTTTGTCGTGCAGATA
ATAGGATCGGCGATGCTGTCTTACTGGAACATCTCCGACGGCGCAAAATGGTTTGCCTAC
TTCGCCATTGGCGTTCCAACCGCCTGGGGACAACCGATGATCTTCTCTTGGCTGAACAGA
AGTCTCTATCGAGACTACAAGAAACGCAACCTGGTAGTCAGTATCACCAGTGATATGGCG
TACGTTACCCTATCATGGGTTCCTATTCTGACTTGGAATGCCCAGGACATGCCCCGATAC
TTTATAGGATTCACCTACAACGCCTGCTTGTCTTCTTTAGGGCTGGTCCTGACCGTCATT
GCTACTTACTTGTGGAAGAGAGACTTGTCGAGCAAGTCGGTAGCGGACGTTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06512g_CDS-001

Protein length: 518 aa.
Product: Conserved hypothetical protein

>YALI0C06512g_CDS-001 MSSHTNHDVISLSDWSDTKLDKRDHIIAVKEANDLEVVEVIEVGEVGDVSSADYSVITSR
SKPNKTWKTLLWDSANKSPGEKHLLIKLDWFLLSSVMLGYFIKTLNQNNINTAYMNGMKE
DYGMSGSQLNYLQTVWIVGYIVGQVPSNQILQRTSARYYLGCLELVWMALTFLTLTCTNI
KSLYALRFFVGLTESGFFPGVEYLLGSWYNKDELTKRSALFAVSGIAASMVTGYLQAAVI
HGLEHTAITPWKWLFVFDGIISFPVALYTMFVNPNTPETTTSWYFTKEDIAIAKERRAQI
GDTGNKEEPFLQVLKRSLKTWHIYFFSLIFLCYNNTCIASTQPSMISWLKSQGYTPTQYN
VYPSAVGRVGIGVTLIMAVVSDAFGGLNYPFVAAYFVVQIIGSAMLSYWNISDGAKWFAY
FAIGVPTAWGQPMIFSWLNRSLYRDYKKRNLVVSITSDMAYVTLSWVPILTWNAQDMPRY
FIGFTYNACLSSLGLVLTVIATYLWKRDLSSKSVADV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG