YALI0C06490g

Overview

Description highly similar to uniprot|O93827 Candida albicans CaPSA1 Mannose-1-phosphate guanyltransferase
Locus type CDS
Locus tag YALI0C06490g

Location

Species Yarrowia lipolytica Positions 869561..871698
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2138 (nuc.)
Previous locus YALI0C06468r Next locus YALI0C06512g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06490g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06490gYALI0C06490g_mRNA-001YALI0C06490g_CDS-001

Nucleotide sequence

 

>YALI0C06490g
ATTGACGACAAAAAAAGTGAGTATCATGTCCACGTGGCTGGGAGGGTCTGGAGGAGACAT
TGGACAACGACGGGGACTCGCGGGGGACAGTGACACAGACGCAATGGCTCCTGTGGATCC
AACTTGAGCGGTCGTTCGACGTGGATCAGCCGCGGTGGTCAGAGTGTCATTTTGTTGGCC
CAAGAACAACCAGTGTGCGACAACATTGTGTGATTCCTGTGATCCAGCACGTTCCGACCG
ACATGGATCAGTGCACAGAATGGTCCGTAATGGCGCGGCTCCTGTGACCGCGGTCGTGTT
GCTAGTTACTCCCTGTTACCTTACCTGACGTGTCCTTTCTCTGTTTCTAGACAACATCCC
ATAAACCACATTTATGAGGCGACTCTGAGAAACTCGAGGTGACATGGACTAGACTATGCG
AGTTTAACGAGTCCCACTGGCACTGGCATGGTGAAACGAACACAATGCGACAGGTCGAAC
AGGTCGAACAGCAGCCCAGTATACCGTATGTTGTTCCGAAACTCTGCACCAGGCGAATGT
CGTGTCACAGATCACTCAACGAAACGCAACTTGATCACGGCAAGACTGCAAAGTGCACCC
GAAGCCCGCTTTCGCCTTCGTGCTTCAAGCCGCCAACCATTGCTCGCACCGGTCGTCCCT
GGATCTATTGCTGTCTTCATTGCCCCACTCTCTCTTGTCCAGTGAGCTCATATTGCTCTA
TCCTAAAGTCTAGAGCCGTGTGTGCCCTTTTTACCTCTGAGCTATTCCTGTCCACGTCAC
CTGTTCTCGAAGCCCTTTGTTCTTTGCTCCCAAGACGGCTATAATTAGAAGCCTGTTTCA
TTGTCTGGGTTGGTCCCAACCATTGAGACGCAGGAGACGAGGGACAGGCCTGTGGAAAAT
TAAGTTCAATATGCATGGAACCGAATCACCACACACTTGGAGAGCGACGACAAAACCCGA
TTTTTCAACCATTGGTTACTAACCCAGATGAAAGGACTTATTCTTGTTGGAGGCTACGGC
ACCCGTCTGCGACCCCTGACTCTCACTCTGCCCAAGCCCCTCGTGGAGTTTGGAAACAAG
CCCATGATTCTCCACCAGGTGGAGTCTCTGGCCGCCGCCGGCGTCAAGGACATTGTCCTG
GCCGTCAACTACAGACCTGAGGTCATGATCGAGACCCTCAAGAAGTACGAGGAGAAGTAC
GGCGTCAACATCACCTTCTCCGTCGAGACCGAGCCTCTCGGAACTGCTGGACCCCTCAAG
CTGGCCGAGGAGATTCTGTGCAAGGACGATACCCCCTTCTTTGTTCTCAATTCCGACGTT
ATCTGCGACTACCCCTTCGCCGAGCTCGCCGAGTTCCACAAGAAGAACAATGCCGAGGCC
ACCATCGTTGCCACAAAGGTCGAGGAGCCCTCCAAGTACGGTGTCATTGTCCACAAGCAG
GGCACCTCCAAGATTGACCGATTCGTCGAGAAGCCCGTCGAGTTCGTCGGCAACCGAATC
AACGCCGGCATTTACATTCTCAACCCCTCCGTTGTCGATCTCATCGATCTGCGACCCACC
TCCATTGAGAAGGAGACTTTCCCCCAGCTGGCTGCCCGAGAGTCTCTGTACTCCTTTGAC
TTGGAGGGCTACTGGATGGATGTTGGACAGCCCAAGGACTTCCTCTCCGGAACTTGTCTT
TACCTGTCTTCTTTGTCCAAGAAGAACCCCGAGGCTCTGGTCCCCACTTCCGAACCCTAC
GTCACCGGTGGAAACGTTCTGGTCGACCCTACTGCCAAGATCTCTCCCCAGGCTAAGATT
GGCCCCAACGTTGTGATTGGACCTGGCGCCGTCATCGGAGAGGGTGCTCGACTCTCTCGA
TGTGTCGTTCTCGCCAACTCTACCATCAAGCCCCATGCATTCGTCAAGAACTCCATCATT
GGCTGGAACGGACGTGTCGGCCGATGGGCTCGAATCGAGAACGTTTCCGTCTTTGGAGAC
GATGTGGAGGTCAAGGACGAGGTTTACGTTAACGGTGGCCGAGTTCTGCCCCACAAGACC
ATCTCCGGCAACATTGAGAAGCCCGAGATTATCATGTAGAGGGATTGGTGTTGATAAGTT
ATAACCATTATAATAATATTTGATTGTGTATGAAAACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06490g_CDS-001

Protein length: 364 aa.
Product: Mannose-1-phosphate guanyltransferase, putative

>YALI0C06490g_CDS-001 MKGLILVGGYGTRLRPLTLTLPKPLVEFGNKPMILHQVESLAAAGVKDIVLAVNYRPEVM
IETLKKYEEKYGVNITFSVETEPLGTAGPLKLAEEILCKDDTPFFVLNSDVICDYPFAEL
AEFHKKNNAEATIVATKVEEPSKYGVIVHKQGTSKIDRFVEKPVEFVGNRINAGIYILNP
SVVDLIDLRPTSIEKETFPQLAARESLYSFDLEGYWMDVGQPKDFLSGTCLYLSSLSKKN
PEALVPTSEPYVTGGNVLVDPTAKISPQAKIGPNVVIGPGAVIGEGARLSRCVVLANSTI
KPHAFVKNSIIGWNGRVGRWARIENVSVFGDDVEVKDEVYVNGGRVLPHKTISGNIEKPE
IIM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG