YALI0C06171g

Overview

Description similar to uniprot|Q884Q9 Pseudomonas syringae Oxidoreductase zinc-binding
Locus type CDS
Locus tag YALI0C06171g

Location

Species Yarrowia lipolytica Positions 802296..803386
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1091 (nuc.)
Previous locus YALI0C06149g Next locus YALI0C06193g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06171g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06171gYALI0C06171g_mRNA-001YALI0C06171g_CDS-001

Nucleotide sequence

 

>YALI0C06171g
ATGTCCTACACCCGAGTCACTCTTCAGCAGCACCCTAAGACCACCATTGAGCCCTCCACC
TTCAAGGATGAGACGGTTCCCATTCCCACCAAGGACGACCTCAAGGACGGCGACTACCTG
ATCAAGGTCAAGCTGGTGTCCCTCGACCCCACCCTTCGAGGCCAGATGTCCGGTCAGAAG
TCGTACATTGAGCCCGTCAAGCTCGGCGACGTTATGCGAGCCTGGGGTCTCGGAGAGGTT
GTTGAGTCCAAGAACCCCGAGTACAAGGTCGGCGATATCGTTTCCGGCGTCGTTGGCTTC
TCTGAGTACGCCATTGGCCACAACCAGGACCACCGAAAGATCCCCAACATTCCCGGCATC
CCTCTGGAGGACAACCTCGGTGTTCTCGGTCTCACCGGTCTCACCGCCTGGTGGGGTATC
AACGGCGTTGCTGGCGGAATTAAGTCTGGCGAGACCGTTCTTGTTTCTGGAGCTGCCGGA
GCCACTGGTTCTGTTGCCGGTCAGCTGGCCAAGATTGCCGGAGCCAAGGTCATTGGTATT
GCCGGTGGTAAGGACAAGTGCGACTTCATCACCAAGGAGCTTGGTTTCGACGTGGCCCTT
GACTACAAGTCCGCCGACTTCAAGAAGGACTTTAAGGAGGCCACCAAGGGGGGTGTTGAC
GTCTACTACGACAACGTCGGCGGTGAGATCCTCGACATGGCTCTCATGGCCGCCAACGAC
TTTGCTCGATTCATCATGTGCGGAGGTATCTCCCAGTACAACCTCGACAAGCCTCAGCCT
CTCTACAACGTTCTGCAGGTTGTTCCCAAGCGAATCAAGATGCAGGGCTTCATTGTCATG
GACCACGGAGACCGATTCCCCGAGATCATCAAGGATCTTGCTGGTCTGATCTCTCAGGGC
AAGCTCAAGGCCAAGACCCATCTGATTGAGGGCCCCGTCACCGGTCTTCCCAACGCTCTC
AAGTCTCTGTTTGAGGGTGCCAACACTGGAAAGATGATCTACAAGCTGGACAGCAAGCTG
TAGAGGGGCTTCCAAAAGCATTAGTATAATTAGTACAAGTATATAGCATAACGGATATGG
ATTAGAATTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06171g_CDS-001

Protein length: 341 aa.
Product: Oxidoreductase zinc-binding, putative

>YALI0C06171g_CDS-001 MSYTRVTLQQHPKTTIEPSTFKDETVPIPTKDDLKDGDYLIKVKLVSLDPTLRGQMSGQK
SYIEPVKLGDVMRAWGLGEVVESKNPEYKVGDIVSGVVGFSEYAIGHNQDHRKIPNIPGI
PLEDNLGVLGLTGLTAWWGINGVAGGIKSGETVLVSGAAGATGSVAGQLAKIAGAKVIGI
AGGKDKCDFITKELGFDVALDYKSADFKKDFKEATKGGVDVYYDNVGGEILDMALMAAND
FARFIMCGGISQYNLDKPQPLYNVLQVVPKRIKMQGFIVMDHGDRFPEIIKDLAGLISQG
KLKAKTHLIEGPVTGLPNALKSLFEGANTGKMIYKLDSKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG