YALI0C06149g

Overview

Description similar to uniprot|P14682 Saccharomyces cerevisiae YDR054C CDC34 Ubiquitin-conjugating enzyme (E2) and catalytic subunit of SCF ubiquitin-protein ligase complex
Locus type CDS
Locus tag YALI0C06149g

Location

Species Yarrowia lipolytica Positions 798442..800166
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1725 (nuc.)
Previous locus YALI0C06127g Next locus YALI0C06171g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06149g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06149gYALI0C06149g_mRNA-001YALI0C06149g_CDS-001

Nucleotide sequence

 

>YALI0C06149g
ATGAGCTCCAGCAGTGCTAATCTTCTTATGAAATACTACCGGGAGCTGACCGATCCCAAG
AAGGCCATCCCTAGTTTTCATATTACCGTGAGTAGTCAGACACCCAAAGTGACAGACCAG
AGGTCTCGAACGAACCCAACCTGTTGGTGGTGACGCAGAAACGACAGCAGCGGTGAGGGT
GAGCAGGCGGCGTGTTGGTGGTTGTGGGGAAGAGCGTTCGCTGTTAGCGCTTCTCCCTGC
CCCAAACCTCGTCATCTACCTGTTCAAGAACCGCGCAGGTGCGTCAGAGTGGGTCACGGT
GTGTCGCAGAGCACCACAGAGTGTTTTGTGGTATGAGTGTTCCTAGGGTGTGCAAGGGAT
TCAGATGACATGTTGAAACGGTTTCTAAGACGTGGGTTCCACGAGCTGTATCCGACACAC
CTGCCTTTCCCCACCCCCCTGACCACCACCTTACACAACCTGTGCCCCACAACCATACGC
GCATACTAACATAGCTCGAGGATGACAATATTTATTCATGGAATGTGGCCGTCATGGTCC
TCAACGAGGACTCAGTATACCACGGCGGATACTTTAGAGTGAGTACGCAGACACTGATGC
TGATTTTGTGGCCCTGTTGGAGGGTTACATTTGATGTGACACACGACACGACAGGAGAAC
AGAGGGAGGCAGAAGGTAGGGCAACGGGATGCAGAGCCCTTGGTGGAAGTAAAGGTAGCA
CCGTCGGAGATACAGAACACCAAGTATCGTTCTCCGCTTGGCGGCCATTCACACCCCTAG
CTGGTTTGGTGACCCCAAAGTTGGTTTGCTGTTGACCTTGTGGCGTGCCAGCTCGAAACC
ATACGTGCTATCGGGCATCCATCGGCCGAACCCCGCACGCGCCACAGTACTCACAATGTA
CAAGTTGCGGTGTTATTGAAGTGCTACTTATTATTTCCCGTCTTCTCTGTTTCCTTTTTT
TTTTCCTGCCCCTCCGTCCATTTCACCGCACCACACCCACCAAGGTGTGGCCTGTATATT
ATTGAGTTTTCCCCGGCAACCGAGATCGGGAATCCGCAGGACAGGACGGAAACACACAGG
TAAATACAAGACAAAACTAACACAGGCACAAATGACATTTCCCGCGGACTTTCCGTATGC
GCCGCCAAAATTCAAATTCACCCCACCCATCTTCCATCCCAACGTGTACAGGGACGGCCG
GCTCTGCATCTCGATTCTCCATCCCGGCGGTGACGTCATGAGCGGAGAGCCAGACCAGGA
GTGCTGGTCGCCAGTGCAGTCGGTGGAGTCTGTGCTCATTAGCATAGTGTCGCTGCTGGA
GGACCCCAATATTAACTCGCCAGCCAACCCCGACGCCAGCGTCATGTGGAAGAAGGACAA
GGAGGAGTACCGAACCAAGGTGCTGCAGGACGTGAAGCTGAGCCGAGAACATATTCCCGA
GGGCTTCGTTGTGCCATCCTCGTCCTCCGCCTACGTAGCTCCCAAGGCACCCGAGCACAA
GGACGTTGTGGATGACAACTTTTGGTACGAGTCGGACGATGCCAGCATGCCTGACGACGA
GTCCATCGATGAGAGCGAGGTGTACTCTGATGACGACGAGGATGACGACGATGATGACGA
CGACGAGGATGAGGAGTAGGCATACCAACTATTTGAACCTCACCGACCCCAGAGACTGAC
CGCTTAGAAACCGAACATAGTAATGCATAATGTGAAAGAGAGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06149g_CDS-001

Protein length: 235 aa.
Product: Ubiquitin-conjugating enzyme (E2), putative

>YALI0C06149g_CDS-001 MSSSSANLLMKYYRELTDPKKAIPSFHITLEDDNIYSWNVAVMVLNEDSVYHGGYFRAQM
TFPADFPYAPPKFKFTPPIFHPNVYRDGRLCISILHPGGDVMSGEPDQECWSPVQSVESV
LISIVSLLEDPNINSPANPDASVMWKKDKEEYRTKVLQDVKLSREHIPEGFVVPSSSSAY
VAPKAPEHKDVVDDNFWYESDDASMPDDESIDESEVYSDDDEDDDDDDDDEDEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG