YALI0C06039g

Overview

Description similar to uniprot|P21243 Saccharomyces cerevisiae YGL011c SCL1 20S proteasome subunit YC7ALPHA/Y8
Locus type CDS
Locus tag YALI0C06039g

Location

Species Yarrowia lipolytica Positions 776629..777593
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 965 (nuc.)
Previous locus YALI0C06017g Next locus YALI0C06061g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C06039g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C06039gYALI0C06039g_mRNA-001YALI0C06039g_CDS-001

Nucleotide sequence

 

>YALI0C06039g
ATGTCAGGTAAGTATTGAGCGATGGATCGGTCGCCAATGGGGACAAGACGGATCACGCGA
CTCGATTGCGCCGCCGACTATTCGGATATCGCTAACACAGGCTCTGCTGGATTCGATCGC
CACATTACCATCTTTTCGCCTGAGGGCCGACTGTACCAGGTCGAGTACGCCTTCAAAGCA
TGCAACTCTGCCAACATCACGTCGCTGGGCATCCGAGGCAAGGACTGCGCGGTTGTCGTT
TCGCAAAAGAAAATCTCCGACAAGCTGTTGGACCCTTCCACCGTGTCGTACATTTTCCGA
ATCTCTCCTAGCATCGGAGCAGTGCTGACTGGCCAGATTCCCGACGCTCGTGCAGCTGTC
CAACGAGCCCGAGGAGAGGCCGCAGAGTTCCGATATAAGTACGGATACGACATGCCCTGC
GATATGCTGGCCAAGCGAATGGCCAACATCAACCAGGTGTACACTCAGAGAGCATACATG
CGACCGCTGGGCGTGATCATGACGCTGATTGCCATTGACGACGAGCGGGGACCTGAGCTG
TACAAGTGCGACCCTGCCGGCTACTACGTGGGATACAAGGCCACTGCATCGGGTCCCAAG
CAGCAGGAGGCTAACAACTTCCTGGAAAAGAAGCTCAAGAAGAAGGAGTATGCTGCTGGA
GATGTCAACGAGGTAACCGAAACCGCCATTTCCGCTCTTTCCACTGCTCTGTCTGTGGAC
TTCAAGAAGAATGACATTGAGATTGGTGTGGCTACAAAGGACGGATTTAGAAAGTTGACT
GTGGAGGAGATTGACGAGCGGCTGGTGGCTATCGCCGAGCAGGATTAATACCGAAGAGAT
GAGAATATGGTACACTGAGAAGATGGCGTGGTGATGGTTTTAGCATGATGATTCTATTAA
CATCCCTCATTGAGGCCAATTAGAGAAGGAATAAATATATTGATATGAAAATGGACAGTG
GAAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C06039g_CDS-001

Protein length: 245 aa.
Product: Alpha 1 subunit of the 20S proteasome, putative

>YALI0C06039g_CDS-001 MSGSAGFDRHITIFSPEGRLYQVEYAFKACNSANITSLGIRGKDCAVVVSQKKISDKLLD
PSTVSYIFRISPSIGAVLTGQIPDARAAVQRARGEAAEFRYKYGYDMPCDMLAKRMANIN
QVYTQRAYMRPLGVIMTLIAIDDERGPELYKCDPAGYYVGYKATASGPKQQEANNFLEKK
LKKKEYAAGDVNEVTETAISALSTALSVDFKKNDIEIGVATKDGFRKLTVEEIDERLVAI
AEQD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG