YALI0C05819g

Overview

Description some similarities with uniprot|P14906 Saccharomyces cerevisiae YOR254c SEC63 ER protein-translocation complex subunit
Locus type CDS
Locus tag YALI0C05819g

Location

Species Yarrowia lipolytica Positions 750100..751463
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1364 (nuc.)
Previous locus YALI0C05797g Next locus YALI0C05841g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05819g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05819gYALI0C05819g_mRNA-001YALI0C05819g_CDS-001

Nucleotide sequence

 

>YALI0C05819g
ATGCTCATCTCTTCCGTGGCAGTGTGGAGCATTTTGCCGTCGGTGTTGGCGCCCATCATC
CAGTGGATCTACGAGAAAATGAAGTATCCGGTGGGCGAGCGACCGACAATCAAAAGCAAG
CAGAACCTGCGACAACGCATCATTTTGACCATTGGCATCTTTTTGCTGGCGTTCCGGGTG
GCTCAGGGCTACTACGATGTCACTAAAGACAACTCGGACCTTTCGTACCAACAGAGTCAC
TACCATGCTCTGAATCTGACCTCCACGGCCCTGCCCCGTGATATTCGTCGACAGTACAAG
AAGTTGTCTGTGACCAACCACCCCGACAAGGCCCGAAGCCTTGGAAAAGACCCCAAGCAG
GCCGAAGACGACTTCATCGAGCTCAAGACCTCGTACGAGATTCTCAGCGACCCCAAACTC
AAGTTTGGCTACGACCGATTCGGACCCACGTTCGTCGACAAGATCAAGCAGCTCATCAAA
CAACAGGAGGAGGGCTCTCACTTCGAGTCCAAGAGCCAGAAATCCAAGAAACAGAAGGAG
GAGTCTGCCATTTCCGACTGGGAAGTGTTGTCGACCGGCGTCAAGAACGCCATGGCCGAG
CACGGACTCACCTTTGCCGTTCTGCTCTTCCTTTGGGTCTTTGGAATGGCGCCCACCGGC
CGATTCTGGCGATTCTACTTTCTGGGATGTCAGGTTCTCATTGAACTGACCATCTACACC
CGTCCCGAGGACAACCGAATCATCCAGGTGCTCGAGTGGTTCCACGCCTATGGATTCCTC
AAAAAGATCCAGCTGCCTTACCAGTTGATTTCTGTGCTGCGAAAGATTCTGCCCGAGTTC
CTTCTTGGAGCCATGCAGCTCTATCTACCGCTGATTGAGCTGTTCTTTGGACACAAGAAG
GCCGACGAAATCAGACAGACCAGCATTGCCAAGACCGGCAAGCTCAAGCCCCAGGACATT
GAAAACGTGTCTACCCTCGTGGACCAGGTGTACTTTGAGGCCAAGAATGCTCTGGACTGG
GAACTCATTGCTTTCCCGAGTGAGCAGAGCAGAAAGGATGTTCGAGACCAGACCATTCAG
GATATGATGGTCATGAAGGTGGATGAAGACCCTGAGGTGAAGGAGGCTTACCGGGAGTTG
AATGTTCCTGTCTAACTGACCAGACGATGCTGACTGTTAGTTCGAGGCGAGCACGAGATT
ACGTGGGGCACAACCAAATGCAGATGAGCCATCAAGCTGATCCACTTGCTGGCGACTACT
CCGGTCCATGACAAGATACGGAGGATGCAAATTACTGAACCGGTTGGCTACCCCGACCAC
TGTTCCTCTGCCGTGTTATAAACTAATATATATATATATATGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05819g_CDS-001

Protein length: 385 aa.
Product: Conserved hypothetical protein

>YALI0C05819g_CDS-001 MLISSVAVWSILPSVLAPIIQWIYEKMKYPVGERPTIKSKQNLRQRIILTIGIFLLAFRV
AQGYYDVTKDNSDLSYQQSHYHALNLTSTALPRDIRRQYKKLSVTNHPDKARSLGKDPKQ
AEDDFIELKTSYEILSDPKLKFGYDRFGPTFVDKIKQLIKQQEEGSHFESKSQKSKKQKE
ESAISDWEVLSTGVKNAMAEHGLTFAVLLFLWVFGMAPTGRFWRFYFLGCQVLIELTIYT
RPEDNRIIQVLEWFHAYGFLKKIQLPYQLISVLRKILPEFLLGAMQLYLPLIELFFGHKK
ADEIRQTSIAKTGKLKPQDIENVSTLVDQVYFEAKNALDWELIAFPSEQSRKDVRDQTIQ
DMMVMKVDEDPEVKEAYRELNVPV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG