YALI0C05797g

Overview

Description weakly similar to uniprot|C4JJD5 Uncinocarpus reesii predicted protein
Locus type CDS
Locus tag YALI0C05797g

Location

Species Yarrowia lipolytica Positions 747127..748684
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1558 (nuc.)
Previous locus YALI0C05775g Next locus YALI0C05819g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05797g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05797gYALI0C05797g_mRNA-001YALI0C05797g_CDS-001

Nucleotide sequence

 

>YALI0C05797g
ATGAGCGAAAAGGAAGTTTCGTTTGTGGATTTGACGGCTGACGAGTCACGTGACGAGAAG
GACGAGGTCGATGTTGCTTCTGTGTCACGTGACGATGCCATTGACGTGTCCGAGGTTCAG
GATGCCTTGGAGCAGATTGATTTGGAAGTTGAGGGAGAGGAGGAAGCGGAGGCTGGCGGA
GATGCCGGCCATGATGTGGAGGAGGAGCTGGAGGAGCAGGGGTCACGTGACGAACCCGAG
GCTGTGGACGAGTCACATGTCAAATCACATGATGAGCTGGTCGGGGAAACGGAGGACACT
ACGGACATCAAGGAAGACGCCAACGGAACCGACAAACTGTCAATTGACCCTAGTACCAGA
CATCAGGACTCGCCAATTGCGCTGGAAACCAAAGAGGTGCTTGAAATGACCGAAGATGGG
GACGTGGATGAGGAGGAGGTTGAGGAAGCTGTTCAGAAGGAGGAGGCTGAGGTTGACGCC
ATGGAGGACAATGCAGCTGCCGACGACGAAGCTGATCATCTGGCCGTTCCCGAGGCACCC
CAATCCGAGTCTTCGTTCGGAGAATTTGCATCCGAAGACGAGTTTGGAGACTTTGATGAT
TTCGAGGAGATGCAGGAGACTGAAGCTGTTGAAGCCCAGCAAGTTCCGACGCTGGATACG
TCACGTGAAGAGACCCCGATGGCGTCTCAGACGAATCTGTCAATGCCCCAGGCTTCCCCA
TCGGTCAAATCTGTGCTTGCAGACGACTCGTTTTCGTCCTTCACCTCTCTTTCTTTTGCT
GCCAAGTCTGTTCTGGAGGACAATGGCTTGGCACAGGTGTTCCCCGAACCCAAGGAGCCT
GCAGGCCAGAAATTTGAGCTTAGTGAGTCTGCATCTCAGATCTACGCTCTTCTGTGCTCG
GTTCCCACTTCGGAACTCAACTTTCTGAAGTCGTTCACTCGACGACTGCTTCTCAAAGAC
GTGGGGGTGCCTCTGGATCTTGACGAGCTGCTCCCTCGCAAGGAAAAACAGCATTTAGTC
ATCAGACGAAGCCGTCGGTCGCTGGACAAGACGTCCAAGTCAAGAGATAGCACTGATGGA
AAGACGCCCCCCGGCGGCTCTCGAGCGGCCACCCCGACTCCTACAGACTCGTCACGTGCC
CAGACGCCTGTGACGGTCGATACCGAGCTCAAGCTCGACTCGTGGCTACGGCTGGTGGAG
ATTCGGCCCGAGCAGCGGGAACGAATGGAGCAGGAAGAGCTTCAGGAGCTGGTCAACCAA
CTCAAGACGGCCAACTCCGAGGCCAAGCTGCTGCTCAAGCAATGGGAAGACAAGCTGGCG
CTGGGATACAAGAACAAGGAGGCGTTTGAAGCTGTTGTGGAGAACATGGTCGGGTTTGCC
CAGAAGCAGAGATTGAAGAAGGGCGGTAAGAAGAAGTGAACAGAGTGCCCCGTGAACGGA
GTGAACAGAGGTTGGAATAACGAAAACAACAACTACGACAACGACTACGACAACGACAAC
GACAACGACAATGACCACGAATCAAATAGACAAATATTTATTGCATACTACACAACTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05797g_CDS-001

Protein length: 473 aa.
Product: Conserved hypothetical protein

>YALI0C05797g_CDS-001 MSEKEVSFVDLTADESRDEKDEVDVASVSRDDAIDVSEVQDALEQIDLEVEGEEEAEAGG
DAGHDVEEELEEQGSRDEPEAVDESHVKSHDELVGETEDTTDIKEDANGTDKLSIDPSTR
HQDSPIALETKEVLEMTEDGDVDEEEVEEAVQKEEAEVDAMEDNAAADDEADHLAVPEAP
QSESSFGEFASEDEFGDFDDFEEMQETEAVEAQQVPTLDTSREETPMASQTNLSMPQASP
SVKSVLADDSFSSFTSLSFAAKSVLEDNGLAQVFPEPKEPAGQKFELSESASQIYALLCS
VPTSELNFLKSFTRRLLLKDVGVPLDLDELLPRKEKQHLVIRRSRRSLDKTSKSRDSTDG
KTPPGGSRAATPTPTDSSRAQTPVTVDTELKLDSWLRLVEIRPEQRERMEQEELQELVNQ
LKTANSEAKLLLKQWEDKLALGYKNKEAFEAVVENMVGFAQKQRLKKGGKKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG