YALI0C05390g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C05390g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 693468..694681
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1214 (nuc.)
Previous locus YALI0C05368g Next locus YALI0C05423r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05390g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05390gYALI0C05390g_mRNA-001YALI0C05390g_CDS-001

Nucleotide sequence

 

>YALI0C05390g
ATGTTCCCTCTTTTTCTCCTCCTAGCTCCGGCTCTGGCTGCTCCAACAGCTACGCCTACC
ATGACCTCAACCTCTTCAACCACCGCCAACTCAGCTGCAATCACTACAACATCTCTGCAA
ACAGTCAAGGCCTTCGGTCTTCATTGCGAGCCCTCCGAATACCGTCTCCACACCAAAACC
GAGATGACATATGAGGACGAGCTATGCATTGTGAACGAGTACGTCTTCACCACCTGTCGA
AACCGGCCTCCTTCCACCTGCCCTCCTGAAGAGCAGGTGCTGGTAACCAAGACTTGGGAA
ACTGATTCAGGTTTCGATATCTGGACCACCACTGGGGTTGTCACTGAATGTGTCAAACAA
ACCACAACCAAAACTTCAACAACTGTCCTTCCTACTAAGACTTTTACTCCAACGCCTTCG
TCCACTGAGTCCAAGCCTACATCAACCCCTAGCACATCCTCCAGAACATCCTCCAAGACT
TCAACTCTGCCGGAAACAACCCCCGAAGCTCAGGTCTCTACCATTCCCCCTACCTCTACT
CTCTACTCCACAACCATCGTCACCACCATCTCCAGCAAGATTGTCACGGTTACTGTTCCC
TGTGACTCTGCAGATGTTCTTGAGACAAAGACGGAGTCAGACACGGAGCCTCCCAAGTCA
ACCACGGAGCCTCCTAAGTCGGTTGGGTCCTCTAAGTCCCTGAGTCCACCCCAGAGCCTG
TCCAGTCGACCACCAAAATTCACATTGAAAATAATACTTCCCTTCCTGAGCCAGAACCGA
TCACCACTTCGGAACCCACTCCCAAGTCAACCACCAAGGCCCTTGAACCCTCCCCCGAGG
TTCCTCAACCCAAGATTCAATCCAAGCCTGATCCCACCACTGAGCCCAAATCTGAGCCGG
TGATCTCTTCAAAGCCTGAGCCTACTCCCGAGCCAATTACGTCTGAATCCGTTCCTCCTG
CTCCTCCTTCTATCGAGACAATGACTTACTTTGTCACCACCACCTCTGTTTGTGATATTC
CCGATTGTTTGACCACCAGTTTCCAGCCTGAACCCTCCAAGCCAGCCGAGCCTACACCTT
CTCCCCCTCCCTCTCCCTCTGAACCAGCTGAGCCCCAGTTCTCGGGAACAGTTCCTCCCC
AGGCAAACGCCGCAGTTCCTATCGTGACTGCACCTCTCCTAGCTCTCATTCCTGTCATCG
CTCTATTTCTGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05390g_CDS-001

Protein length: 404 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C05390g_CDS-001 MFPLFLLLAPALAAPTATPTMTSTSSTTANSAAITTTSLQTVKAFGLHCEPSEYRLHTKT
EMTYEDELCIVNEYVFTTCRNRPPSTCPPEEQVLVTKTWETDSGFDIWTTTGVVTECVKQ
TTTKTSTTVLPTKTFTPTPSSTESKPTSTPSTSSRTSSKTSTLPETTPEAQVSTIPPTST
LYSTTIVTTISSKIVTVTVPCDSADVLETKTESDTEPPKSTTEPPKSVGSSKSLSPPQSL
SSRPPKFTLKIILPFLSQNRSPLRNPLPSQPPRPLNPPPRFLNPRFNPSLIPPLSPNLPV
ISSKPEPTPEPITSESVPPAPPSIETMTYFVTTTSVCDIPDCLTTSFQPEPSKPAEPTPS
PPPSPSEPAEPQFSGTVPPQANAAVPIVTAPLLALIPVIALFL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG