YALI0C05148g

Overview

Description highly similar to uniprot|Q10421 Schizosaccharomyces pombe 40S ribosomal protein S28 (S33)
Locus type CDS
Locus tag YALI0C05148g

Location

Species Yarrowia lipolytica Positions 660007..660776
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 770 (nuc.)
Previous locus YALI0C05126g Next locus YALI0C05170g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05148g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05148gYALI0C05148g_mRNA-001YALI0C05148g_CDS-001

Nucleotide sequence

 

>YALI0C05148g
ATGGTGAGTTATTGTGTGGCGACACAAGAAGTGGTGGAGGAGTTGCGGGCGACGATTCTG
GACGCTACGGACGACATGTGGCGGGTATTTTGGACCGCTGAACGTGCACAGATGGAGAGA
GAAATTTGATATGCGACACAAGCGACACAAGCGCACAAAAGCGACACTGAAAAGGCGCAA
ACGGAGGGGACCAAGGTCGAGAGACCGGTGAAGTGGCAGAGACCTAGATTCGATTTTCCG
ACTTTGCCACTTGTTTTTGTGTATTCGACGTGAGTCGTTTGGTCCATGCTAGGCGACATG
TCCATATGACTGGATTCATGAGCCAGGACAGCAAAGACCACCCAGGACCCCCTAACATCT
CGCCTGCATCAACCACACCATCTACATGACTCCTCGCTAGCAGTCCAGATCAATCCACTC
GTCCACTCAGACAACCGACCAAACAACCAACCCCAACTCATACTAACCACAGGATAACGC
TAAAGCCGCCCCCGTCAAGCTCGCCAAGGTCGTCAAGGTTCTCGGCCGAACCGGATCTCG
AGGAGGAGTGACTCAGGTCCGAGTCGAGTTCATCGACGACGAGTCCCGATCTATTGTCCG
AAACGTCAAGGGCCCCGTCCGAGAGAACGACATTCTCTGTCTCATGGAGTCCGAGCGTGA
GGCTCGACGACTCCGATAAGCTGTTTCTTCTTTTTACAAAGAGAAAGCATTTTGTCGCCC
AAAAAACCATATGTATTAATCGTACAATTTGATGTATCCATGTTGAGATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05148g_CDS-001

Protein length: 70 aa.
Product: 40S ribosomal protein S28 (S33), putative

>YALI0C05148g_CDS-001 MDNAKAAPVKLAKVVKVLGRTGSRGGVTQVRVEFIDDESRSIVRNVKGPVRENDILCLME
SEREARRLR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG