YALI0C05126g

Overview

Description weakly similar to uniprot|P40038 Saccharomyces cerevisiae YER059W (ohnolog of YIL050W) PCL6 cyclin like protein interacting with PHO85P
Locus type CDS
Locus tag YALI0C05126g

Location

Species Yarrowia lipolytica Positions 655416..657526
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2111 (nuc.)
Previous locus YALI0C05104g Next locus YALI0C05148g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C05126g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C05126gYALI0C05126g_mRNA-001YALI0C05126g_CDS-001

Nucleotide sequence

 

>YALI0C05126g
ATGTCAGACGTGGAAATGGTCGAGGGCCAGGGGTACTCGGACTCGGACGAGTCCACGGGA
TACGACCACGTGCACCCTGCCTCCTACTCGGGCATTGGCATTCCCGCCCACACACACGAC
CACGCCCAGGCCCAGGGAGCCACGCCGTCCAACTCGGCGTTTTTTAGCCCCTCCAGCTCC
ACCCGCCAGACCGGAATGGGCGCTTACAACGAGCCCAGCTCGGTGAGCAGCTCGTACAAG
AGCGGCGTGGCGTCGAGCGCCTTTGCAGGCTCATTTTCGGCCAACAGCTTCACCAACACA
AACACAAACACAAACGCCGGCTCGTTCACAAACTCGTTTGCAGCGTCGTCAGGTGGACCG
AACGCAAACCCCACGGCGCCGTCAGTTTCTGGAACGGGTGCTTCCGTGCAGACGGGCTTC
TTCCCGTCATCACTCACGTCGTCCATCCAGCAACAACGCACGTCGTCGTACCAGTCGTTT
GTGCAGCCCCCTACCGTCCAGGGGTCGCGGCTGACGTCGTTCGCCACCCAGACGTTCGAG
CCGGACCATTCGCCCGAGGGCCAGGCCCACTCGCCCAACATTGACGCGCCGGCCCACTGG
CGCTCGTCGTCGTTCGGCGAGGCCGTCGAGTTCCAGCCGTCGGTGCGTACGTCGAACCTG
ACATCCAAGCTTGCGGGCAGCAACTCCAATTCTGCCAGCGCTAGCAAGGCCGGCAGTGCG
TCCGGATCCGTGGACAGCACCGTGGCGCCACCGTCGTCTTCGTTCGGCGGCTTTTCGGAC
TACGGCTCGTCCGACACGGCCGCGGCGTCGTACAGTGGCTACACCACAGCCCCGTCGTCG
CGGCGGGACTCGACCGGCGAGAAGTCGCTGTTTGCACGGCGCAAGCCCTCGTCTGGGCGC
ATGCAGCAGATTGATGATGTCAAGGGCAAGGGAGTTGGAGAGGAGGAAGATGAAGATGAC
CATGACGATAAGAAGGTCAAGGTCGGAGAGGTTTCCGAGCAGGTGGAGGTAAAGGAGGAG
GGTGATGAGGTTGATGTGGTTAAGAAAGAGACTGCTGTTGTTGAGGGCGGTGATAAGACC
GAGGCCACTGCTCCTACTGACCCCACTTCGGGCCCCGAACATGTCATGGACAGTATAGGC
AACGTATCTGTGCCCGTGTCCGAAACCGAAGACGATGTGCATCTGGACATTGCCAACTAC
CCCGTCAATGACCTGCTGCTTATGCTCACCGCTCTCCTGCAGAAGATCATTGAGGCCAAT
GACTCACTCCACCCGCACCACTACCATCACGCGTCTCAGAATTATGTGTCCAACAAGTTC
ACCGCCAACGTGCTGGCGTTTCACGGACGAAACATCCCAGCCATCTCGCTGCATTCGTAC
CTGCTGCGAATCCTCAAGTACTGTCCCACTACAAACGAGGTCTTTCTGTCGCTGCTAGTG
TACTTTGACCGCATTGCCAAGCGGGCCAATGCCGGCGAATTTACCGGCGCGCATGCTGCT
GCGTCTAACGACGGCACCAGCAGCACCGCGTCGTCGCTGCTGGCCAAGCAGGTGCCGCCG
CCGTCCGACATTCCGGCGACCCAGCTGTTTGTTATGGACAGCTATAACATTCACCGGCTC
ATTATTGCAGGCATCACCGTGAGCTCCAAGTTCTTTTCAGACGTGTTTTACAAGAACTCG
CGGTATGCCAAGGTTGGCGGTTTGCCTGTGGAGGAACTGAATCATTTGGAACTGCAGTTT
CTGCTGCTGACCGATTTCCACCTTATGATTCCTCTGGAGGTTCTGCAGCGGTATGGAAAT
TTGCTGTTGCGATTTTGGAAACGAGAGGGGGAGGCTGCGAATGAGCAGACCAACAGTTCG
TGAGCGTCGAATCATGAGCGCGCGAATCAATAGGTGAGGTGACGGTGCATGAGCCAGCTT
GTGAGCGGAACGCATGAACTTACCGGTGCAGCGTCAGTTGGTAGAAGTTAGGGTCAACGG
ATTGGACGCTCTTCACTTGCTTCGCTCATGAACTCATACAATTCATCACAGGACCCAGTC
CATGGCGGCAGCCGTCTACAACAGCTGCCTCTTATTTATATAGATCATTAATGGTATCGT
TATAGATGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C05126g_CDS-001

Protein length: 621 aa.
Product: Conserved hypothetical protein

>YALI0C05126g_CDS-001 MSDVEMVEGQGYSDSDESTGYDHVHPASYSGIGIPAHTHDHAQAQGATPSNSAFFSPSSS
TRQTGMGAYNEPSSVSSSYKSGVASSAFAGSFSANSFTNTNTNTNAGSFTNSFAASSGGP
NANPTAPSVSGTGASVQTGFFPSSLTSSIQQQRTSSYQSFVQPPTVQGSRLTSFATQTFE
PDHSPEGQAHSPNIDAPAHWRSSSFGEAVEFQPSVRTSNLTSKLAGSNSNSASASKAGSA
SGSVDSTVAPPSSSFGGFSDYGSSDTAAASYSGYTTAPSSRRDSTGEKSLFARRKPSSGR
MQQIDDVKGKGVGEEEDEDDHDDKKVKVGEVSEQVEVKEEGDEVDVVKKETAVVEGGDKT
EATAPTDPTSGPEHVMDSIGNVSVPVSETEDDVHLDIANYPVNDLLLMLTALLQKIIEAN
DSLHPHHYHHASQNYVSNKFTANVLAFHGRNIPAISLHSYLLRILKYCPTTNEVFLSLLV
YFDRIAKRANAGEFTGAHAAASNDGTSSTASSLLAKQVPPPSDIPATQLFVMDSYNIHRL
IIAGITVSSKFFSDVFYKNSRYAKVGGLPVEELNHLELQFLLLTDFHLMIPLEVLQRYGN
LLLRFWKREGEAANEQTNSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG