YALI0C04587g

Overview

Description similar to uniprot|Q10156 Schizosaccharomyces pombe Protein kinase lkh1
Locus type CDS
Locus tag YALI0C04587g

Location

Species Yarrowia lipolytica Positions 609121..611224
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2104 (nuc.)
Previous locus YALI0C04565g Next locus YALI0C04620g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04587g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04587gYALI0C04587g_mRNA-001YALI0C04587g_CDS-001

Nucleotide sequence

 

>YALI0C04587g
ATGTCCACAACAATCGCCTCGCCTATGTCCACGCCGACCACCCAGGACCCTGGTCCAACC
AATAACCCCTTCCGACACCTGCAGACCAACTACTCGCAGCTTCCCCGACATATGATCTCC
CCTTCTCTGGACAAGTTTTCCGACTCCTCCAGCTCGTACTGGGGTTCGCGACGGTCCACG
GGAACTAAGGAACCCGTAGGACTTGCCCCCGAGGTGCCCCAAAACGTTGTCGATGACGAA
CTGCAGATCATCGGAGCCCAGGTGCTGCGAGACGCGTCTCCTGGCGATGGAGACGACGAA
GACAACTCGTCTGAACACACCACAGCCTCGACCAGTGGCTCTTCCACCGGCGGCTCGCCC
TCCAAAAAGCACCAGCCCAACTGGCATGACTTTTACAAAAACGGGTACCCCGATGAAGTC
ATTGTTATCGACTCTGATAGTGATGACGACCACGGCGACGACGTCAACAACACCCAAGTG
GCTCAAGTAGCAACTACTGCCACGACGTCAAAAACTACTATCAACCGTCGAATTTCGTCC
GCCGCTGACCTGCCCGTCAAGCGACGAAAGTTCTCGCAATCGTCGACATCAGGCTCCACC
ACCGCTACCCACAACACGTCGTCCTCCGACCAGCAACTCGACACAAACACACATACAACA
CTCGACCAGGACTCGGACAAAAATCTGCTGGACGATGACGAGAACGACACTCCTCTGACT
CCACCACCAAAGCTTCGTCGAAAGATCCCCGAGGTGTATGTTCGGCCTGTGGCTGACGCC
AAGAAACTGTTGGCGTCTCAGTACGACGATAAGGACGGCCATTACGTGACCACGTTTTCG
GACGTGTTCACCGAGCGATACGTCATTCGAAAGCTGCTCGGACAAGGCACTTTTGGTAAA
GTCGTGTCGGCTTACGACAAACAGACTGACTCGCTATGTGCCATCAAAATAATCCGAGCG
GTGCCCAAGTACCGAGACGCGTCGAAAATCGAGCTGCGTGTTCTCACAGCCTTGGCCGAC
TATGACGCTATGAACAAGAACAGATGTATTCATCTGCGCGAATGCTTCGACTTCAGAAAC
CATGTCTGTATCGTCACAGACCTGCTGGACATTTCCGTCTTTGACTTTATGCGTGACAAC
CGGTTCCAGCCCTTCCCTGGCTCTCACATTCAGAAGCTTGCCAAGCAGCTCATCAAGAGT
GTGGCCTTTTTACACGGTCTGGGGCTTATTCACACGGATCTCAAGCCCGAAAACATTCTA
CTGAAGAAGGCAGCTTTCGTGCGGGTGGCCAACAAAAACCTGGGACCGTCGTCGATCCGC
AAACACAACTACTACCGCGCACACGACCCCAAAAAGACGGAGCCCAAGACTCGTAACGTG
CTCAAGGACACATGTATCCATCTCATTGACTTTGGCTCAGCCATCTTTGACGATGAATAC
CACTCGTCGGTGGTGTCGACGCGCCACTACCGGGCCCCCGAAATCATTCTCGGCGTGGGC
TGGTCTTATGCCTGTGATATGTGGTCCATAGGCTGTATTCTGGTGGAGCTTTTTACTGGA
GACGCCCTGTTCCACACCCACGAGGACTTTGAGCACCTAGCGCTCATGGAGGCCATTATC
GGATACCCGTTCCCCAAGGCGTTCGTCAAGGAGATGATCTCCAAAAAACCCAGCGCTCAG
GTGGGCAACTTTTTCAACGCCCGATCCGGCAAGCTCGGATACCCCAACAAGGACACCACC
ACGAGCTCGAGGCACTACATCCGAGATACTCTGTGTCTGACAGACTTGATCCACACATCG
ACGCAATCCACGAAGAGCCGCAGCGAAGGAGCCAACCCTGATGGGCAGTTCTGGGACCTG
TTCCTCGACTTGGTGCGCAAGATGCTTGTGTTTGACCCCCGTGAACGAATTACTGCTCGA
GAGGCCCTCCAGCATGATTGGTTCAAATGTGGGATTTCCGATGAGGGTAGTGTTTAAATC
ACAACTCTTCTGATACTAACTGAGGACGCGTTAGCACGGGACATGTGCCCGTCCTCACTT
TTTTAATTTTATTGGTTATGGGATGGTTAGATTTATATGTAATTTAGTGTATTTATTGTT
TATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04587g_CDS-001

Protein length: 659 aa.
Product: Protein kinase, putative

>YALI0C04587g_CDS-001 MSTTIASPMSTPTTQDPGPTNNPFRHLQTNYSQLPRHMISPSLDKFSDSSSSYWGSRRST
GTKEPVGLAPEVPQNVVDDELQIIGAQVLRDASPGDGDDEDNSSEHTTASTSGSSTGGSP
SKKHQPNWHDFYKNGYPDEVIVIDSDSDDDHGDDVNNTQVAQVATTATTSKTTINRRISS
AADLPVKRRKFSQSSTSGSTTATHNTSSSDQQLDTNTHTTLDQDSDKNLLDDDENDTPLT
PPPKLRRKIPEVYVRPVADAKKLLASQYDDKDGHYVTTFSDVFTERYVIRKLLGQGTFGK
VVSAYDKQTDSLCAIKIIRAVPKYRDASKIELRVLTALADYDAMNKNRCIHLRECFDFRN
HVCIVTDLLDISVFDFMRDNRFQPFPGSHIQKLAKQLIKSVAFLHGLGLIHTDLKPENIL
LKKAAFVRVANKNLGPSSIRKHNYYRAHDPKKTEPKTRNVLKDTCIHLIDFGSAIFDDEY
HSSVVSTRHYRAPEIILGVGWSYACDMWSIGCILVELFTGDALFHTHEDFEHLALMEAII
GYPFPKAFVKEMISKKPSAQVGNFFNARSGKLGYPNKDTTTSSRHYIRDTLCLTDLIHTS
TQSTKSRSEGANPDGQFWDLFLDLVRKMLVFDPRERITAREALQHDWFKCGISDEGSV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG