YALI0C04433g

Overview

Description highly similar to uniprot|Q92413 Emericella nidulans Ornithine aminotransferase (Ornithine--oxo-acid aminotransferase)
Locus type CDS
Locus tag YALI0C04433g

Location

Species Yarrowia lipolytica Positions 591369..592777
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1409 (nuc.)
Previous locus YALI0C04411g Next locus YALI0C04455g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04433g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04433gYALI0C04433g_mRNA-001YALI0C04433g_CDS-001

Nucleotide sequence

 

>YALI0C04433g
ATGTCTACCGCCGCCATTGAACGAGAAAACAAGCATTCCGCACACAACTACCACCCTCTG
CCCGTGGTGTTCACCAAGGCCCTAGGAGCCAAGGTGTGGGATCCGGAAGGAAAGGAGTAC
CTGGACTTCCTGTCTGCCTACTCTGCCGTCAACCAGGGCCATTGCCATCCCAAGATCGTC
AAGGCTCTGTGTGACCAGGCCCAGAAGCTGACCCTGTCTTCTCGAGCCTTCCACGCTGAG
ATCTTTGGAGAGTTCGCTGAGTACATCACCAACTACTTTGGTTTCGACAAGGTACTCCCC
ATGAACACCGGAGCCGAGGCCGTCGAGACCGGAATCAAGATTGCCCGAAAGTGGGGCTAC
CTCAAGAAGGGCATCCCAGCTGGAGAGGCTCTGGTGCTCGCTGCCACTGAGAACTTCCAC
GGACGAACCCTCGCCATTGTCTCCATGTCTACCGATAACGAGGCCACCGACAACTACGGC
CCTTACCTTGAGGGTGTCGGTCCCTTCATCCCCGACTCCAACGGTAAGATTGACCCCAAG
ACCGCCAAGCCTCTGCGATACAACAACATTGGCGATGTGGAGGAGGCCTTCAACAACGCC
GGATCCAAGATCGCCGCCTTCCTCGTCGAGCCTATCCAGGGAGAGGCCGGAATCATTGTC
CCCGATAAGGAGTACCTGCAGCAGGTCCGAAAGCTGTGTGACAAGCATAACGTGCTGCTT
ATCTGTGACGAGATCCAAACCGGTATCGCCCGAACCGGAAAGCTGCTCTGTTTCGAGCAC
TCCGAGATCCGACCCGACATGGTTCTGCTTGGAAAGGCCATCTCCGGTGGTGTCACTCCC
GTCTCTGCTGTTCTGGCCGACAACGCTGTCATGGACGTGATCACCCCCGGTACCCACGGA
TCCACCTACGGAGGTAACCCTCTGGCATGTGCTGTGGCCATGGCTGCCCTGGACGTTGTA
AAGGACGAGCAGCTCGTCGAGCGAGCAGACCGACTTGGAAACGAGTTCCGAGCTGCCCTC
GAGCCCCTCATCAAGGAGTCCAACGGTATTGTCACTACTGTCCGAGGTAAGGGTCTGTTG
AACGCCATTGTCATCGACTCGTCCAAGGCCAACGGCCGATCTGCCTGGGACCTCTGTGTG
CTCATGTCCAACAAGGGTCTGCTGGCCAAGCCCACTCATGAGAACATCATCCGATTGGCT
CCCCCTCTGGTCATCACTGATGAGGACATGAAGAAGGGTCTTGAGATCATCCGAGAGTCT
GTTCTCGAGCTTCCTAACGCTCCCCATGCTGCTCACTAATCAACTGACAGCGTCATGGCT
ACACAAAACACAACCCCGCTATATTATAACAACATGTGATATGTATATATAAGAATGAAG
TTCTGACAAATTTTTTTTCTCACTACCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04433g_CDS-001

Protein length: 433 aa.
Product: Ornithine aminotransferase (Ornithine--oxo-acid aminotransferase), putative

>YALI0C04433g_CDS-001 MSTAAIERENKHSAHNYHPLPVVFTKALGAKVWDPEGKEYLDFLSAYSAVNQGHCHPKIV
KALCDQAQKLTLSSRAFHAEIFGEFAEYITNYFGFDKVLPMNTGAEAVETGIKIARKWGY
LKKGIPAGEALVLAATENFHGRTLAIVSMSTDNEATDNYGPYLEGVGPFIPDSNGKIDPK
TAKPLRYNNIGDVEEAFNNAGSKIAAFLVEPIQGEAGIIVPDKEYLQQVRKLCDKHNVLL
ICDEIQTGIARTGKLLCFEHSEIRPDMVLLGKAISGGVTPVSAVLADNAVMDVITPGTHG
STYGGNPLACAVAMAALDVVKDEQLVERADRLGNEFRAALEPLIKESNGIVTTVRGKGLL
NAIVIDSSKANGRSAWDLCVLMSNKGLLAKPTHENIIRLAPPLVITDEDMKKGLEIIRES
VLELPNAPHAAH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG