YALI0C04092g

Overview

Description similar to uniprot|Q00317 Candida boidinii PMP30B Peroxisomal membrane protein (Peroxin-11B)
Locus type CDS
Locus tag YALI0C04092g

Location

Species Yarrowia lipolytica Positions 538369..539143
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 775 (nuc.)
Previous locus YALI0C04070g Next locus YALI0C04114g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04092g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04092gYALI0C04092g_mRNA-001YALI0C04092g_CDS-001

Nucleotide sequence

 

>YALI0C04092g
ATGTCCGTTTGCCTCGCCCAGAACCCCACCGTGACCCGAGTGGTCAAGCTGCTTGAGACC
CACGTCGGTCGAGACAAGATCCTGCGGTCCATCCAGTACTTCTCGCGGTTCCTGACCTAC
TACCTGTTCCGAAAGGGCTACACCAAGGACACCATTGATATTTTCCGAAAGATCCAGAAC
CAGTTCTCCATGGCCCGAAAGCTGTTCCGAGTTGGAAAGCCCATTGGCCATCTCAAGACC
GCCGCCGTGTCGTTCGAGAACAAGACCCTGGACCCTTGTCTGCGATACACAACCATTGGC
CGAAACCTCGGCTACGCCATCTACCTGGTCTTTGACTCCATCATCTACATCAACGGCTCC
GGCATCAAGAAGATTGACAACATCAAGACCATCAAGAAGGTCGGCTCCTACTTCTGGGCC
TTTGGTATCTTCTGCAACATTCTCAACTCCATCCACAAGATCAACATCTGCAAGAAGAAG
CGAGCTGCTCTGGCAGCAGAGAAGGAGAAGGACACCACCTCCGCCAAGAAGAACGACAAG
GACGCTGCCGCTGCCCAGAAGCAGCTGGTCTGGGATCTCCTCGATTTCTCCATCCCCCTC
ACCTCTCTCGGCTACCTGCACCTCGATGACGGTCTCGTCGGCCTGGCTGGTTTCGCTACC
GGTATTATGGGTGTCCAGAAGGCCTGGGCCGCTACTGCTTAGATAGATAACTCGCAAGAG
ACGTATGCTCAATAGGGAGAGCACAAAGAATAATGAGTTTTGACTGTGTTGTAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04092g_CDS-001

Protein length: 234 aa.
Product: Peroxisomal membrane protein, putative

>YALI0C04092g_CDS-001 MSVCLAQNPTVTRVVKLLETHVGRDKILRSIQYFSRFLTYYLFRKGYTKDTIDIFRKIQN
QFSMARKLFRVGKPIGHLKTAAVSFENKTLDPCLRYTTIGRNLGYAIYLVFDSIIYINGS
GIKKIDNIKTIKKVGSYFWAFGIFCNILNSIHKINICKKKRAALAAEKEKDTTSAKKNDK
DAAAAQKQLVWDLLDFSIPLTSLGYLHLDDGLVGLAGFATGIMGVQKAWAATA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG