YALI0C03916g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C03916g

Location

Species Yarrowia lipolytica Positions 520989..524516
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 3528 (nuc.)
Previous locus YALI0C03894g Next locus YALI0C03938r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03916g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03916gYALI0C03916g_mRNA-001YALI0C03916g_CDS-001

Nucleotide sequence

 

>YALI0C03916g
ATGAGTGACGAGACGGACGTGACGGACTTTCTCAAGCGGATCCGCGAGCTCGGCGAGAAG
AAGTGAGTGCATTCAAGCGACAGACAGAGACGAATACCGTGCAACATGACACTAACCCAG
TGACCGAGAAGACGAGATTCGAGCTCAAAAGCTGGAAAACGAAATCCAGGAAGGAAAAGA
GCGCCGAAGACGATTGCGGGCCGAACGATCTCGATCCACGTCACCTTCCAAGCAGGAAAG
AGATGTTCAGGATACCATTAGCGCTTTGGTGGGAGCAGGTAAAGGACGAGAACTAGCTCC
AAAGACATATGGAGATTTGAAGGATGATGAGAGCGACAGCAGCAAGAACCTCAAGGAGAA
GGAAGCTGTCAAACCCCTGGTCCGATCCAAACCTGCTGCTCGAAAGGTTTCTGATTCCAA
AGCTCTCAAGGACTCCATTCGAGCCTCAATTGCCGGAGATAAGTCAGGAGACAGAAGTAC
AAGTACAAAGATTGGAATGAAGGACTCCATTCGAGCTTCCATTGCCGAGGAGAAGGAGGA
GAAGATAGAGAAGCCGGTGCTGAAACAGAAACCTTCTTTCAAAGAGGAAAAGCCTGTGGA
GAAGCCAGTACTCCAGCAGAAGCCTTCTTTCAAGGAGGAGAAGGTGGAGAAAGCAACACT
TAATCCCTCTTATAAGGACGACAGGACCAAGAACGACAAGCAGTTTGGTAATTCATTTGG
CGAACGGGATGACCCCTTTGCACCACTGCCTACGGACAAGGCATCTCCCTACGTGGCCAA
ACAGTCGCCAACTATGAACAGAATCGGGGCTGGTCATATGCCTCGAACAAAGCTCGACGA
CAAACCCAGAGACATTGCCATTCCAGGTATCATTCAGTCATCGTCTACCTCCGGTTTGAG
AACACAGTCGATCCACCGAGAAGGGCAGTCGCCCCAGCATCAGAGCAGAACTCCCCGGGC
TCTTCCTGGTATGGCTGAATTGGGTAACTCGCGTCACAATCTGCATTTGGACGATACTAC
GCCCAAGCGGTCTTCCACGACTGTGAGAACCCCCCTGGGCCAATCTAGTACTCCCCTGGG
TCAGACTCGAACACCTACCCTGGGTCATTCTCCCGACCTGAGAAGAACCCCCACTCTGGC
GCATTCGCCATCTTCACCCAACCTGTCGCGATCGCCTCCTCCTTCTCGAGGCAATTTCAT
TCATTCAGCCCTGAAACGACACGGTACACTGCGTGACTTTAAGCAGGTTGGACACCAACA
GCCCGTGGAGGTGGAGATCAACCCCGAGTTTGAAGCGCTACTTAAGGAGGCCGATGAAGA
GGAGGAGGAGGAGAGAAGAGCTGCGGAGAAGAAGGAGAAGGAGAACGATCTACGACCTAC
TCCTTCGGTCAAGAGCAAGCCTTCGGTCGACAAGATCAGACAGTTGATGGCTGCCAGGAA
CTCGCCCAAGCCCAAGTCTGGTTTCGATGAGCGAGACGAGGAAAAGGAAATGTCGCGATC
CGACTCTGTGTCTTCCATTCAGTCAGAGAAAGATATTTCTGTGGAGGAGCTCAAGAAGTT
CCGACCCCCTCCTCCTGTTTCGAGGTCGTCAGAGACTAGAACTTCGGAGAGTACTACTCC
TGAGCCTGTGTCGCGTTCTGACAAAACAGAGATTCGAAACCGACCCCCTCCTCCTGTTTC
GCGATCCTCCTCCTCTTCTCTGTCTCGATCTGACTCGATTCAGCCCGAGAGGGATATATC
TTCGTCTGCTGGTCGTCCCAAACCTGCCACCTCGTCAAAGAGTCTCAAGGACAGTATTCG
AGAGTCGTTGCGAGAAAGCAAGCTCACTAAGAGCCCCAAACCGGCCTCTCCCAGTCCTAG
AGCTGAGTCTCCAGCAGCGGACGTGACTTCTCCTGCTTCCCCTTCTCTTGCTGACTCAGA
CACTGTTCCTGAGCTCTCTCCTCTTCGACATTCTGACTCTCGACGGTTCTCCCCCGTACG
GCAGTCTTCGTGGCTTGAATCTGCGCTCAAGAAGAACCATAGTCCCGAGCGTAACTCCTC
CATTCGGCTTTCTCGGTCTCCTTCTCCCGTCAAGTCTCCATTTGGAAGCCGAGATAGAGA
CATGAGAGGGCGAGAAGAGACTCCCCGGGGACGGGATTTTGGCCGAACCGAAGATTCGCA
GTCTCCCAAGATTCTGTCCCCCAAGGTTCTCTCGCCGAGCGTTTCTTCTTCAAAACTGGG
CTCCCCTTCTGTCGTTTCTCCCCGTGGAAATGAAGATGAGGAGCGTCTGGCTCGTCTCAA
GGCTCTCAGAAGCTCGTTGAGTGATAAGAAGCCCGCTCCCAAGCCTGCCACGGATGAGTC
ACTGCCTGACTTGGCACGTGTGGGTTCTTTGAAGCCTCCTAAGCCTGCTCCTACGCTTAA
GCCCAGCACTTCTGAGAAGGAGCGACTTGCTGAGCTGAAAAACAGCCTGCGAAAGAGTGA
ACAGAAGAATTATGTGGCTCCTGACGTGGTTAAGAACAATCTGCTGTCTGCGAAGGGCTC
TCTCAAGGAGTCCACTGGTCCCCAGTCACTGGAACTCAAGGATGAGGTTCTAGAGCGTCT
GACTGTGGCGCAAAAGAAGCTACGAGAGACTGAGGGACCCAAGAACGCTGAGCTGAAGGA
TGAGGTCCAGGAACGGCTGACAGCTGCCCAAAAGAAGCTGCAGAAGACGGAGGGTCCGAA
AAATGCAGAGCTGAAGGACGAGGTGCTGGAGCGCCTGACGATGGCCCATGGATCACTAAG
ACGGTCTCCCGAGCGATCTCCTGAACGGTCTCCCGAGCGTCCTCAGCCTGGAAACGCCTC
CAACTTCACTTCTGCGCTTGCTAACGCTCTGACCCGAGGCCCCAATGCTTCGAGTCCAAA
CCTGGCGTCTTCAAATGATTCTGGACGTGGTGCTGAGCGTTCTTTCTCTCTCAGAAAGGC
TGCTACTATTGACTCTTCTGAAATTGGGCGCAAGAACAAGGGCGAGAAGCTGACTCATAT
GACGAAGGGACGGGCCAAGGGTCCGAAGAGACGGCTCCCTAAGAGCGTTGAGGGCAGCAG
TAACGGTAGCAACTCCGGCTCGACGAGCCGACCCGGTTCGACGAGCAGTTCACGACCCGG
TTCGACTACGAGCTCACGACCTGGATCTGCTTTTGGCTCACGACCTGGATCTTCTTTCGG
ATCCCGTTCTGAGACTGGATCCAGAACAGATCTCCTGTCTGAATTTTCCAAGCCCTCATC
TCGGCCCACTTCCACTACGGCGTCTCCTACGGTGAGATCAGCGCCTAGTTTCCCTCCCCG
ACCAGAGAAGCCGTCTGAGCTGAACATTTCCAAGAGAGGAGACAGTGACAAGGACGATGA
CAAGGACGCCAAGGAGAAAAAGAAGCCACCGCCAATTCGGGCATCCTCTAGATCCGTCTC
CAACAAGATTCCCCCTCCTATTCGAAAACCCTCCTCCAGTGTGGCTCGTTAAGGTATTTA
TATAATAATGAATGACGGAGGCCATGCGCTGAAGTTATGTTTGATGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03916g_CDS-001

Protein length: 1138 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C03916g_CDS-001 MSDETDVTDFLKRIRELGEKNDREDEIRAQKLENEIQEGKERRRRLRAERSRSTSPSKQE
RDVQDTISALVGAGKGRELAPKTYGDLKDDESDSSKNLKEKEAVKPLVRSKPAARKVSDS
KALKDSIRASIAGDKSGDRSTSTKIGMKDSIRASIAEEKEEKIEKPVLKQKPSFKEEKPV
EKPVLQQKPSFKEEKVEKATLNPSYKDDRTKNDKQFGNSFGERDDPFAPLPTDKASPYVA
KQSPTMNRIGAGHMPRTKLDDKPRDIAIPGIIQSSSTSGLRTQSIHREGQSPQHQSRTPR
ALPGMAELGNSRHNLHLDDTTPKRSSTTVRTPLGQSSTPLGQTRTPTLGHSPDLRRTPTL
AHSPSSPNLSRSPPPSRGNFIHSALKRHGTLRDFKQVGHQQPVEVEINPEFEALLKEADE
EEEEERRAAEKKEKENDLRPTPSVKSKPSVDKIRQLMAARNSPKPKSGFDERDEEKEMSR
SDSVSSIQSEKDISVEELKKFRPPPPVSRSSETRTSESTTPEPVSRSDKTEIRNRPPPPV
SRSSSSSLSRSDSIQPERDISSSAGRPKPATSSKSLKDSIRESLRESKLTKSPKPASPSP
RAESPAADVTSPASPSLADSDTVPELSPLRHSDSRRFSPVRQSSWLESALKKNHSPERNS
SIRLSRSPSPVKSPFGSRDRDMRGREETPRGRDFGRTEDSQSPKILSPKVLSPSVSSSKL
GSPSVVSPRGNEDEERLARLKALRSSLSDKKPAPKPATDESLPDLARVGSLKPPKPAPTL
KPSTSEKERLAELKNSLRKSEQKNYVAPDVVKNNLLSAKGSLKESTGPQSLELKDEVLER
LTVAQKKLRETEGPKNAELKDEVQERLTAAQKKLQKTEGPKNAELKDEVLERLTMAHGSL
RRSPERSPERSPERPQPGNASNFTSALANALTRGPNASSPNLASSNDSGRGAERSFSLRK
AATIDSSEIGRKNKGEKLTHMTKGRAKGPKRRLPKSVEGSSNGSNSGSTSRPGSTSSSRP
GSTTSSRPGSAFGSRPGSSFGSRSETGSRTDLLSEFSKPSSRPTSTTASPTVRSAPSFPP
RPEKPSELNISKRGDSDKDDDKDAKEKKKPPPIRASSRSVSNKIPPPIRKPSSSVAR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG