YALI0C03784g

Overview

Description similar to uniprot|P38336 Saccharomyces cerevisiae YBR257W POP4 Subunit of both RNase MRP, which cleaves pre- rRNA, and nuclear RNase P, which cleaves tRNA precursors to generate mature 5' ends
Locus type CDS
Locus tag YALI0C03784g

Location

Species Yarrowia lipolytica Positions 500189..501119
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 931 (nuc.)
Previous locus YALI0C03762g Next locus YALI0C03806g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03784g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03784gYALI0C03784g_mRNA-001YALI0C03784g_CDS-001

Nucleotide sequence

 

>YALI0C03784g
ATGAACATCAACAAGCAAAAACTGAGCATCGAGGAGGGGCTGCTGAAGCAAGCGGGATAT
CGGGGTAGTGAGATTGACGAGCTGATCTCGCAAAGATACTCCATGGGAGGAACACAGAAA
CCGATTTTGGTGTTGACGCCAAATGAGGGCCAAACGGGAGTTGCAGAGGTATGGAAGGCG
CCTCAGGAGATTGTCAAGACGCCGCGAACCAAAAAACAACGTCTGCTCAACGACCACAAA
CCACGGGTGGCCCTTTCGCAGTTTTTGAAGGACGCCAAAACTCATCAAAAGACAATCAAG
GGTGTCATGGAGAGAATATACCGGTCCAAAAGCTGTGATACCACCGTGACAAAGAAGGAA
ATGGAGTCGTGGCGTCAACTGCCAAAGTACTCAACCTACACAAGACTCAACAAGCTCTGG
AATGGGTACATTACTGACTTGCTGATGGTCAAGGAAGGAGACGACGACATCAACTCGGCC
AAGAAGATGAACTACGCCCAGAAACTCACTTCGGCGGACTTCAACGGTGCCAAAATCACA
GTTATTGAGGCCAGAAACCCCTCTATCGTCGGTTTGACTGGTATTGTGGCGTGGGAAGCG
AAATCAAATTTCGTTATTGTGTGTGAGGGAGGAAAGTGCTTTGAGAAGATGGATAGCCTG
GAAGGAATGGAGCTGGATAACCCTGGTAAAGACACACAGGTAGGAGGACTCAAGATTGTG
GACAAGTCTGGAACTCGGTTCATTGTGCATGTTGATGTGGGAGAAATGGAATTTGAGATT
ATCGGGTCTCGGTTCCTGTTTAGAACCGCAGACAGATCAGGTAAGAAGTTCAAGCCCAAG
AATGTTGATCTTTTGTAGGTGGGAATGGGTAAATATGAAGAGATAATTAGCATGCATATA
ATACAAGTATATAAGATGACCCTACGGAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03784g_CDS-001

Protein length: 286 aa.
Product: Subunit of both RNase MRP and nuclear RNase P, putative

>YALI0C03784g_CDS-001 MNINKQKLSIEEGLLKQAGYRGSEIDELISQRYSMGGTQKPILVLTPNEGQTGVAEVWKA
PQEIVKTPRTKKQRLLNDHKPRVALSQFLKDAKTHQKTIKGVMERIYRSKSCDTTVTKKE
MESWRQLPKYSTYTRLNKLWNGYITDLLMVKEGDDDINSAKKMNYAQKLTSADFNGAKIT
VIEARNPSIVGLTGIVAWEAKSNFVIVCEGGKCFEKMDSLEGMELDNPGKDTQVGGLKIV
DKSGTRFIVHVDVGEMEFEIIGSRFLFRTADRSGKKFKPKNVDLL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG