YALI0C03762g

Overview

Description similar to uniprot|Q8AWD3 Brachydanio rerio Similar to lipoyltransferase
Locus type CDS
Locus tag YALI0C03762g

Location

Species Yarrowia lipolytica Positions 498485..499724
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1240 (nuc.)
Previous locus YALI0C03740r Next locus YALI0C03784g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03762g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03762gYALI0C03762g_mRNA-001YALI0C03762g_CDS-001

Nucleotide sequence

 

>YALI0C03762g
ATGATCCGACGAATACAGACATTAAGAACCATCAAACGACCTCAAATATGTTACACAAAC
CGACACCAGCATCGCTACAACTCGACCGTGACCCTAGAGACCATTGCATCCCAACCAGGA
CCTCAGATCTTCGTTTCGGCCATTTCTGATCCATTTCTGAATCTCGCGTTGGAGGAATTT
CTGTACGACCACATGCCTGCACGTGATCCGAAATCTGAACCCAATCCCGATCCTGACGCT
CTTTCCAACAACCGATTAGTCATCTACGTCAACTCTCCCTGCGTGGTAATCGGACGAAAT
CAAAATCCCTGGCGAGAAGCCAACATTCCTGTGCTCGAGAGTCTTCGGATTCCAATGATC
CGGCGGAAATCCGGCGGTGGAACAGTTGTACACGATCTGGGAAACGTCAATTACTGTTTT
ATGACGAGTAACGAGGATTTCTCGCGAGAGAAGCACTCCAAAATGATTATGGAGAGTGTC
AATGCAGTTGGAGATGCGCCGGGAGGTCCCAATGTCGAGCTGAAGCTGAATTCGCGCTTT
GATATCGTCGATATTAGTGACAACAAGGTATCTGGATCTGCATACAAGATTCAAAGACAC
AAGGCGTACCACCACGGAACTATGCTGTTGAACTCGAAACTTGACGTGCTGAAGGCCTTA
TTGCATCGGGGAGAGAACCTGGGCGTCATCGAGGGCAACGGAACGGCATCTGTCAAGTCA
CCGGTCACTAATATTGGTATGGAAAAGAATCTGTTTATTGAAACAGTCATCAAGGGCTTC
TCTGGCATGTATGGAGTTGATTTCGAGGACGAAAGCGGGCCTTTTGTGCAACTCAACGTG
ATCCAGCAGTCGGACTTACCCGAGAAGGTATACAACACCGCCGAGGAGATGAAGACGTAC
CACTGGGCATATGGACAGACTCCCAAGTTTACCCACGTGATCAAGAATGATGATCTGGAC
GTGGAAGTCGAGTTTTTCGTGGAAAAAGGAATTCTGAAGGACGTCAAGGCCGATTCAGAG
CACCTGCAGCAGTTCAAGTACCTTAAGAGTGTGGCGCAAAACGAGGGAGTTCAATACATT
GGAGGAAAAATAGCGGCTTTCGTGACAGACGAGAGGCTGGGAGACTGGATTGCCAAGACA
ATTGATGGAAGTGGAACGGAGAAGGAAGAGATTGTGCTAGTTGGAAAGAAGGAAAAGTCT
CTGAAGGATATGCTAGGTTAATTGAGTACGTACACAACAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03762g_CDS-001

Protein length: 407 aa.
Product: Lipoyltransferase, putative

>YALI0C03762g_CDS-001 MIRRIQTLRTIKRPQICYTNRHQHRYNSTVTLETIASQPGPQIFVSAISDPFLNLALEEF
LYDHMPARDPKSEPNPDPDALSNNRLVIYVNSPCVVIGRNQNPWREANIPVLESLRIPMI
RRKSGGGTVVHDLGNVNYCFMTSNEDFSREKHSKMIMESVNAVGDAPGGPNVELKLNSRF
DIVDISDNKVSGSAYKIQRHKAYHHGTMLLNSKLDVLKALLHRGENLGVIEGNGTASVKS
PVTNIGMEKNLFIETVIKGFSGMYGVDFEDESGPFVQLNVIQQSDLPEKVYNTAEEMKTY
HWAYGQTPKFTHVIKNDDLDVEVEFFVEKGILKDVKADSEHLQQFKYLKSVAQNEGVQYI
GGKIAAFVTDERLGDWIAKTIDGSGTEKEEIVLVGKKEKSLKDMLG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG