YALI0C01617g

Overview

Description some similarities with uniprot|P42951 Saccharomyces cerevisiae YJL100w
Locus type CDS
Locus tag YALI0C01617g

Location

Species Yarrowia lipolytica Positions 220844..222187
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1344 (nuc.)
Previous locus YALI0C01595g Next locus YALI0C01639g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01617g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01617gYALI0C01617g_mRNA-001YALI0C01617g_CDS-001

Nucleotide sequence

 

>YALI0C01617g
ATGTCTTTGCCTACATATGAACAGCCGAAAAAATCGTGGCTCTCACTGCCCACCAACCCT
GTGACTCGACTGAAACAGTCCCTCTTCTTCAACGTCCAGAACAGCCCCTACACCAGATCC
CGTGATGAGATCCTGCGCGAGATTGACACGCGACACAGACACGACACGCAGGAGTTTCTC
GAGCTTCAGAAGGCTGCCGTTGACCTGGTAGCTGTTGGAGAGCTCAGTGGCACCTACAAG
ACTGTTGATTATGTGATCCCTGAGCCTGAGAAGGATAAGGGACAAGGTGGAGATAATGAC
GATAGTGAGGACGACAGCGATGATGATGAGGTGGTGGAGGCTGGTCCTTCTGGTGGCGCT
ATTGAGGAGGCGATTCCTGAAGCCTCGTCTTCTCTAGCTGGACCTTCTGGTTCAGGACGG
GAAGGTCTGTTTCGACCTTGCTCGGAAGAGTCATACGAGCTGCTCTCTTACCTTCCTCTC
CCCTTCACCAAGCCCTGCACAGTCTACCGAACTGGGTATGTGTGTGAGGCGGCTGCGTCT
GTGCTCAATGCCCTGCTGGGCTTCAACGTGGTCCCTCTGACACGTGTTACTTCCGTCAAG
GATAAATTGGGCTCTTTGCTTGAGCTTGATGACGATGCTATTGCCGCCTTTGAGTACTTC
AAGGCCAACGGCGAGGAAAATACTCCCGAGTGGCTCAATCTGGAGATCCAGAAGCTCGCG
GTGGTGGACTGGCTGTGTCGAAACATGAACCGAACCCCTGGCAATTGGTACATTAACACC
GCCACCGAGCAGATTCACGGTAACGGTCTGGACACCGGTTACGACTCGTGTTTCCCCTAC
AAGCACCCCTGGATGTTCCGGTGGAACCTTCCTGGCAAGGTGACAAGTGCTCCCTGGAGC
GAGGAGATCAGAGCTCGAGTTGTGCCTCTGCTAACGTCACAGGAGTGGTGGCAAGTTGCC
TCGGACGCCTTGTACCATACCTTCTTTGACAACCACGACGACTTTGAGGAGGGATTCTGG
AACTCTCAGTGGGCCATTTTCCGCGGCCAAGCTTACTTGCTGTTGAGTAACTTGCTCAGA
AAAGACTCTACTCCTGACGACTTGTCTCGAGGCCATCCTAAGTTGATGATTGCGTACGAT
GGAGGTATGGACAAGGCTCAGAGAGGCGTGGAGTTGTACATTGAGCCTAAGGGTAAATAA
GGAAGCAGGCGGCTATCACTTGAGGACCTAGGACCGTAGTGGTTAATATTCTGTACTCCC
ACGCGCTGTCCCCATATCTCCTTATCGTAGTCTGTTTTACCTAGTCACCCAATATTTAAA
TAGTAATAGAGCATGTTTCGTATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01617g_CDS-001

Protein length: 400 aa.
Product: Conserved hypothetical protein

>YALI0C01617g_CDS-001 MSLPTYEQPKKSWLSLPTNPVTRLKQSLFFNVQNSPYTRSRDEILREIDTRHRHDTQEFL
ELQKAAVDLVAVGELSGTYKTVDYVIPEPEKDKGQGGDNDDSEDDSDDDEVVEAGPSGGA
IEEAIPEASSSLAGPSGSGREGLFRPCSEESYELLSYLPLPFTKPCTVYRTGYVCEAAAS
VLNALLGFNVVPLTRVTSVKDKLGSLLELDDDAIAAFEYFKANGEENTPEWLNLEIQKLA
VVDWLCRNMNRTPGNWYINTATEQIHGNGLDTGYDSCFPYKHPWMFRWNLPGKVTSAPWS
EEIRARVVPLLTSQEWWQVASDALYHTFFDNHDDFEEGFWNSQWAIFRGQAYLLLSNLLR
KDSTPDDLSRGHPKLMIAYDGGMDKAQRGVELYIEPKGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG