YALI0C01595g

Overview

Description similar to uniprot|Q06245 Saccharomyces cerevisiae YLR166C SEC10 Essential 100kDa subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p, and Exo84p)
Locus type CDS
Locus tag YALI0C01595g

Location

Species Yarrowia lipolytica Positions 217269..220180
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2912 (nuc.)
Previous locus YALI0C01584r Next locus YALI0C01617g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01595g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01595gYALI0C01595g_mRNA-001YALI0C01595g_CDS-001

Nucleotide sequence

 

>YALI0C01595g
AGTGAGTATGAATGAGTGGTTTGATTGAAGAGCTGAGAGCAGTAGGATAGGATAGAAGGT
GTCGGGACGTCACTTGAGTGTGTATGGAGCGATAGGAGTCCCGTCACATGACCTCAGTAT
CGTGTGATCTGTCTTTAGCCATATGAAGAGGTGCAACATACCGATGGCACTAGCTGACTT
TCGCAGAGAGCAGCTGTTCATGTGATGGTTGTGGTAATGTGATCTGATTCCTCGAACAGT
TTAATTGCTATCTTCTTCCCATTCTTGGGCTGATATGTGGCGCATTCCGTGGTTGAAGTG
GTATCCACTTCAAGCAATCACATTGATGATGTGTGCCCTCCTCAGCTGCAACCCTCTCTA
TGGGTTCACTCAGATCTACGGTCATCGTTTTTGTGACTCTCTTTCCGTACTAACACAGTG
TCCATCTACGCCTTGGACGACTCTACTCGTCAACTTCTACAAGAAGAAAACTTTCTGGGC
CGGTTTTCCCCCAAAGACCTCGTTGAGCAACTCTCTCACAACGGCGACGCTCCTCCCGCC
AACGAGTCGACGCTCGAGTCTCTCGATCCGAAACCTTACATTCGTACGTTTGAAGCTGCT
CTGAATGAATTGAAACGACTAAGAGAACAAGTTTCGTCCCGTGAGAATGATGTCGCCGGC
GACGTGGATCAGGCCGAGCTGACCCATTCGAGAATCGTTCTCAATCTCCAAAAGTCGGTC
CAGTCTACAGTCTCCGAGTACACCGACATGGAGCAGTTGATGGCCGAGGTGAGCAAACAG
ACGTCCTCTCTGGGCGACAAAATGGACCGTATTTCGGGCCAGCATCAAAAGGCCATTGCA
TCGCATTTCCTCATCAACTGTTACCTTTCGTTTGTAAAGAAGAGCAGCTGTTTGGAGCTC
GAGAGAATGTGGAAAGACGGTCCCAGTGGTCAGCGAAAGTGTGCCACCTACGTGCGCCAA
TTATTGATTCTGTCGTCGAAGATCGACACTGTGGAGGCTTGTCGACGAGCCCAGAGTGAT
ATTGAGAAGTTTGCAGAGAAAATCGAGAAGGATTTACTCGATGTGTTTGACCAGGCATAC
AGAAACGCCGATATGCTGATGATGAAGGACTCGGCCGACGTCCTGACGGACTTCAACGGC
GGAACGAACGTTATTATGGCGTTTGTCAACCAGCATGACTTCTTTATTGCTCAGGATAAA
GTGGTGGCTGCCAACTCTGAGCCAGATGAAGCTGTTCTCAAAGAACTGGCTGATCCTAAC
AACTCCGATCCCCAATTCGACCATGTGACCGAAGAGCTCTGTTCCGAGGTTGTTTCTGTG
GTCAACACCGAAACCGAGATCATCAAGCGTGTTTTCAAGGAGCCCGTGGTTGTTTTGCAG
GTGTTCCTTCAGCGAGTATTTGCCCAGCGAATCCAGCAGCGAATCGAGCTGTTTCTGAGC
TCTGCAGAGGCCATGAGTACCCTTGCATACGTCAGATCGCTGCATCTGGCTTACAATGTG
GTCTCTAGTTTGGTGAAGAAGTTGAAGGACTTCTTTTCGTCGGAGAACCTCGACACTCAC
GATTCCCTGGCAGCTCTGCTTGACCAGAACTTTGCCGACATCTTCATTCCCCATATCGAC
AAGAATCGGTACTTTGAGAGCGAAAAGAAGTCACTTAGTGAGCTCATTTCTGCTGCTCTA
TGGAAGTTCGCCGAGTTCCACGAAAAGAAGTCATCACACAAAGAAGGTGGTCTGCTTGGT
CGAATCACCCATTCTCTTGACAACGAAGACAACAAGGGTATCGGCAACTTCATGCGAAAC
TTCAGAGACAGAAACGAGCGTCACAGCACTCCTGACTCGCCTGTTCCTCTGGAGCCAGAA
GATGGAGAGATTAAGATTGATGTAGTGCAAATGTGTCTGAAGTGTCTGGCTGAGAGTATT
CAGCGAGTGCTTGAACTGGCACACCAGAATGAAATCAACGACTGTGTGGTTTCTCTGCAT
GACCTGCTGATTGAGTCAGTGGGTAAGAGTTACATTGAGACCGGTCTGGACGATGCCATT
GTGTCTCGTGACATGAAGACCATCTCTTTTGTGCATCTCAAGACGATCCGACGAGTTCTG
ACTGCCATTCGACTCATGTCCGTTGTGATCAACTCTGTGATTGTCCCTTTGACCGATTCT
CATGGTCAAGGAAGACGATACATTGTCATGCAGACCAATAATTTTTTTACAAAGTGCGAA
GAGAAGATCAATTCAATTCTGCAGGTGACCTTGGACATTGTTTCTGCTCGAGTTACTGTT
CTGTTGAGCAAGCAGAAGAAGCGAGACTTTCTACCAAAGGAAGACACCCCTACACATCAG
CCCACTAGCACTTGTCTCGAGCTGATTTCTTTCCTCACAGAAGTGCACGATGCCGGTGCC
ATCTTTCTCATTGAGCAAACACTCAAACAGTTCCTATTCCATGTTGGAATCGAATTTAGA
GATGCTCTTCTTGAGCATCTTAAAAAGTTTACCGTCTCTGTGGCTGGAGGCTCGATTCTG
AGCATGGATATGGCCAACTACACCAAGATGGTCAACTCGTGGGGCATCTCTGAGTTGTCT
GAGGCGTTTGTGATTGTGAACGACCTGGCTGGTATTTTCGCAGCTGAGCTGGCCATGGTT
AACTCACTGGTCAAGGAGGGTCCTCTGAGTAAGACCAAGCCGTTTATTCTGAAGGAGTAT
CTGAGTAAACGAAGTGATTATCAGGGAGGAACGGTGAACAAGATGTTTGCAGCAACGAAT
AAGATCCAGGCGTTGGGTATGATGTAGACATGACCCCTGAGCACATCGTATGGGTCTTAA
TTCGCATCTTGAGCTGAGCGATGATGTCGCATACTGTGGTCAGCGCAAGTGCTTGGCTGG
TATATATTGACAATCAACATTAGATATTGATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01595g_CDS-001

Protein length: 790 aa.
Product: Subunit of the exocyst complex, putative

>YALI0C01595g_CDS-001 MSIYALDDSTRQLLQEENFLGRFSPKDLVEQLSHNGDAPPANESTLESLDPKPYIRTFEA
ALNELKRLREQVSSRENDVAGDVDQAELTHSRIVLNLQKSVQSTVSEYTDMEQLMAEVSK
QTSSLGDKMDRISGQHQKAIASHFLINCYLSFVKKSSCLELERMWKDGPSGQRKCATYVR
QLLILSSKIDTVEACRRAQSDIEKFAEKIEKDLLDVFDQAYRNADMLMMKDSADVLTDFN
GGTNVIMAFVNQHDFFIAQDKVVAANSEPDEAVLKELADPNNSDPQFDHVTEELCSEVVS
VVNTETEIIKRVFKEPVVVLQVFLQRVFAQRIQQRIELFLSSAEAMSTLAYVRSLHLAYN
VVSSLVKKLKDFFSSENLDTHDSLAALLDQNFADIFIPHIDKNRYFESEKKSLSELISAA
LWKFAEFHEKKSSHKEGGLLGRITHSLDNEDNKGIGNFMRNFRDRNERHSTPDSPVPLEP
EDGEIKIDVVQMCLKCLAESIQRVLELAHQNEINDCVVSLHDLLIESVGKSYIETGLDDA
IVSRDMKTISFVHLKTIRRVLTAIRLMSVVINSVIVPLTDSHGQGRRYIVMQTNNFFTKC
EEKINSILQVTLDIVSARVTVLLSKQKKRDFLPKEDTPTHQPTSTCLELISFLTEVHDAG
AIFLIEQTLKQFLFHVGIEFRDALLEHLKKFTVSVAGGSILSMDMANYTKMVNSWGISEL
SEAFVIVNDLAGIFAAELAMVNSLVKEGPLSKTKPFILKEYLSKRSDYQGGTVNKMFAAT
NKIQALGMM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG