YALI0B22286g

Overview

Description similar to uniprot|Q06103 Saccharomyces cerevisiae YPR108w RPN7 subunit of the regulatory particle of the proteasome
Locus type CDS
Locus tag YALI0B22286g

Location

Species Yarrowia lipolytica Positions 2930726..2932209
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1484 (nuc.)
Previous locus YALI0B22264g Next locus YALI0B22308g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22286g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22286gYALI0B22286g_mRNA-001YALI0B22286g_CDS-001

Nucleotide sequence

 

>YALI0B22286g
ATGACAGAAGAGAAAAAAGCCATCCCCGACTACGAGCTCAGCAAGCATCTGTTTGTGCTG
CGAAACCCGTCGCTCAAGGACCTTCATCCCGAGGCCAAGGAGGCCCTCATGACGGCCATC
TTTGATCGCAACCTCGCTGGCGTCTACAAGTCGCTTTACAACTTTGACCAGAGCCAGAGC
ACAGAAACGTCTGGAGGCGTCGTGGTGGATGTTCCCGAAGACCAGCAGGGCCAGATTGGC
CACGAGGGAGAGAGCCCCTCCGAGGACGTTGATATGGAGGAGGTCAAGGCCGAGGTGGCC
GATGGCAAGACCGTGGAGGAGGTGGAGGAGAAGATTGTGGATAGCAAGCCGCAGCCCATC
ACACAGATCATCGTGCCTGCCAACACTCCGTCCGAGTCGTTGGCTCAGTCCGTGCCTGCT
TTCTCCAAAGCCAAGTACGACAAGATGGTGGCAGCCAATGACGCACGCGTGGCCGAGCTG
AGAGAAGCCATTGCCCAGGTGGAGAAGGACGACGGCGGAGAACTGGAGCTGCTGCAGGCC
CGAGTCAAGCTTGGAGAGTACTACGCCGAGATTGGCGACCGGTTCAACGCCATCCTGACC
CTGCGAAAGGCCGCAGAGACCACCTCTACTGGTGCCAAGATCGACATCCTATTCACCATT
GTGCGCCTGGGCTTCTTCTACCTCGATTGCGCCTTTGTGGGCCGAGAACTGGAGGCCGTT
AAAGTGCTTATCGAACGAGGAGGAGACTGGGAGCGACGAAACAAGTACAAGACATACTGG
GGCCTGCACTGTCTGTCAATCCGAAAGTTCGAGGAGGCTTCCTCGTGTCTCATTGACTCT
TTGTCTACCTTCACCTCTGTTGAAATCGCCTCCTACGAGGAGATTGTGGAGTATGCTATC
ATTGCTGGAGCTGTGGCTCTGGATCGAGTCGATCTGAAGCGAAAGATCATCGACTCACCC
GAGGTGCTGTCTTTGCTGCCCACCACCCCTGCTCTTGGTCCCATTGCCACTCTCACCAAC
TCGCTGTACACTGCTGAGTACTCTGTGCTGTTCACCTCTCTGGCCCAGCTTGAGACCCAG
TCTCTGCGACCATCAAAGTACCTGGCACCCCACAGAGCCTTCTACGTGCGGGAGATGCGA
CGAAAGGCCTACGCACAGCTTCTGGAGTCTTACAAAACGCTGTCTCTCAAGAGCATGGCC
AATGCATTTGGAGTGTCGTCCCAGTTTCTGGACAACGACCTCTCTAAGTTTATTTCTCAG
AACAAGCTCAACTGTGTGATTGACCGGGTCAACGGTATCATTGAGAGCAACCGACCCGAC
TCCAAGAACGCCCAGTACCAGGCTCTGATTAAGCAGGGAGACGCTCTGTTGACCAAGCTG
CAAAAGTACGGTGCTGCTGTTCGACTGAGTGGTGCTGAGAAGTAAGGTGGTAGATGTATG
AACATAGATCTTAATTGTAGATGATGATAACTAGTGAGGATATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22286g_CDS-001

Protein length: 475 aa.
Product: Non-ATPase regulatory subunit of the 26S proteasome, putative

>YALI0B22286g_CDS-001 MTEEKKAIPDYELSKHLFVLRNPSLKDLHPEAKEALMTAIFDRNLAGVYKSLYNFDQSQS
TETSGGVVVDVPEDQQGQIGHEGESPSEDVDMEEVKAEVADGKTVEEVEEKIVDSKPQPI
TQIIVPANTPSESLAQSVPAFSKAKYDKMVAANDARVAELREAIAQVEKDDGGELELLQA
RVKLGEYYAEIGDRFNAILTLRKAAETTSTGAKIDILFTIVRLGFFYLDCAFVGRELEAV
KVLIERGGDWERRNKYKTYWGLHCLSIRKFEEASSCLIDSLSTFTSVEIASYEEIVEYAI
IAGAVALDRVDLKRKIIDSPEVLSLLPTTPALGPIATLTNSLYTAEYSVLFTSLAQLETQ
SLRPSKYLAPHRAFYVREMRRKAYAQLLESYKTLSLKSMANAFGVSSQFLDNDLSKFISQ
NKLNCVIDRVNGIIESNRPDSKNAQYQALIKQGDALLTKLQKYGAAVRLSGAEK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG