YALI0B22264g

Overview

Description weakly similar to uniprot|Q9UST8 Schizosaccharomyces pombe Ribonuclease H
Locus type CDS
Locus tag YALI0B22264g

Location

Species Yarrowia lipolytica Positions 2929842..2930672
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 831 (nuc.)
Previous locus YALI0B22242g Next locus YALI0B22286g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22264g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22264gYALI0B22264g_mRNA-001YALI0B22264g_CDS-001

Nucleotide sequence

 

>YALI0B22264g
ATGTATATAAGTAGATACACCAGCTTATTACTACAATACAACTGTCACCTTCTCATGTAC
CCATATCCCATACCTCCACCACCGGTACCAACATACTATGCAGACGACAATCGCATTGTT
CGTCGATACGAGACTAACGGACGACCCGAACTGACGGGACCATTCTTTGTCGTCAAGATG
GGCCATCGACCTGGAATTTATCGCGCCAGACATATTGCTCGCAGAATGACTGAGAACTTT
CCAGACACTACTCCGACGTCGTGGGACACTGAAGAGGAGGCTTTAGCATGGCTCTATTCG
CCCTACATGCACGAGCTGGTTCTGCGAAACGAGTACTCCATCATCAAACGAGTCGTATAC
TGCCATGGAGTTCTTCAAGGTGTTCAGTCTGGAACCATGGGCGGTCTGGGCTGTTACTTT
GGCCAGTCAAACGAGTGCAACTTTTCAGGACCACTAGTAGGAACAACGCAAACCAAAACT
CGGGTGGCATACGCAGCTGTGCTCCAGGCTCTCAAGATCATCTCGTACAGAAGAGAGCAC
TATCTGTGGCAGATCAGAAGCACCAGTGCTGGAATTCCCAAAACAATTGCACAAGCCAGA
CAAGTCTGGAGAACTTCTCAGTGGCACAACAGTAAAATTGTCCCAGAAGAAGGGAAAGAT
GTGCTGGAAGCGATAATGACACTGTTGGACCGCTTCATAATCACGGTCGAAATCAATTGC
CTGCTGGATTTTGGACCCGTAGAGAGACAGGCATCTAGTATCCATGCTGTAGAGAAGCTG
GCTATGGATGGCGTCTACGAGCCTGTCTTCTACATGCCTGAAGGGAATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22264g_CDS-001

Protein length: 277 aa.
Product: Conserved hypothetical protein

>YALI0B22264g_CDS-001 MYISRYTSLLLQYNCHLLMYPYPIPPPPVPTYYADDNRIVRRYETNGRPELTGPFFVVKM
GHRPGIYRARHIARRMTENFPDTTPTSWDTEEEALAWLYSPYMHELVLRNEYSIIKRVVY
CHGVLQGVQSGTMGGLGCYFGQSNECNFSGPLVGTTQTKTRVAYAAVLQALKIISYRREH
YLWQIRSTSAGIPKTIAQARQVWRTSQWHNSKIVPEEGKDVLEAIMTLLDRFIITVEINC
LLDFGPVERQASSIHAVEKLAMDGVYEPVFYMPEGN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG