YALI0B22198g

Overview

Description some similarities with uniprot|P53438 Saccharomyces cerevisiae YMR016C (ohnolog of YKL043W) SOK2 regulatory protein in the PKA signal transduction pathway
Locus type CDS
Locus tag YALI0B22198g

Location

Species Yarrowia lipolytica Positions 2922203..2922872
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 670 (nuc.)
Previous locus YALI0B22176g Next locus YALI0B22220g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22198g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22198gYALI0B22198g_mRNA-001YALI0B22198g_CDS-001

Nucleotide sequence

 

>YALI0B22198g
ATGATGTCATTTTATCCCGAAGAAGACCGACAGAACCGCTACTCCAACCTGGTATCGGTA
CCCTCTTACTCGCCCACCTTTGGCAACTCGTCGCTGTACCAGCAGCAGCAGCAGCATCAG
CATCAGCAGCAGCAGCAGGTCCAGCAGCGATCGGTGACGCCCCGAAACCAATACTCGGCC
GGCGCATACTCGTCCATGGGCTCGGCGTCGTCTATGGGCTCGGCGTCATCCTTCTACCAC
TACAACAGCCCAACCTCCATGCACGCACGGTTCAACGCTTCTAGAGGCTTCGAGGCGGAG
GACGACATGGAGTTCTGCCCCGCGCTATCCCCAAGTCACATGGGCTATGTGTCCTCATCG
TCTTCGGACTCCAACTCCCCCTCCCAGCTGCCATCCCAGCTGTACAATGAAACCACACCA
GACACCCCTTTCTCGCCCGAGCTGGCCCACACGGGCTCGCCCAAGGTGACTGCTCGAGTG
AGAAAGGCCATCCAGATTGTCGATCCATCCACTGGCCTGCGAGTCTCGTCTCCTACCATG
AAATAGAGAGGAGATCTGAGAGTCAGACTCCACAGCAGCCAGTGTGACATTCCATGAGTT
ATGACTGATGACACTAAGATGTATTATTTAACTGTTATTTATTGCATAAGAGATATGATT
ATGATTGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22198g_CDS-001

Protein length: 182 aa.
Product: Conserved hypothetical protein

>YALI0B22198g_CDS-001 MMSFYPEEDRQNRYSNLVSVPSYSPTFGNSSLYQQQQQHQHQQQQQVQQRSVTPRNQYSA
GAYSSMGSASSMGSASSFYHYNSPTSMHARFNASRGFEAEDDMEFCPALSPSHMGYVSSS
SSDSNSPSQLPSQLYNETTPDTPFSPELAHTGSPKVTARVRKAIQIVDPSTGLRVSSPTM
K*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG