YALI0B22176g

Overview

Description weakly similar to uniprot|Q12132 Saccharomyces cerevisiae YPL230W (ohnolog of YMR182C) USV1 putative transcription factor
Locus type CDS
Locus tag YALI0B22176g

Location

Species Yarrowia lipolytica Positions 2914791..2916928
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 2138 (nuc.)
Previous locus YALI0B22154g Next locus YALI0B22198g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22176g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22176gYALI0B22176g_mRNA-001YALI0B22176g_CDS-001

Nucleotide sequence

 

>YALI0B22176g
ATGAACTCCCCACCACCGGTGCCAAAGAAAACCAAAACCAAGTACCCGAAAATCTTCCAA
TGTACGGGGTACGGCGACTGCAAAATGACCTTCACCCGGTCGGAGCATCTGGCTCGACAC
ATTCGAAAACACACGGGCGAACGGCCGTTCCGATGCCACTGCGGCAAGACGTTTTCGCGT
CTCGATAACCTGCGGCAGCACATCCAGACGGTGCACGCCAACGACCACCACATTCTGCAT
GCCCCACTCCCTCCGCCTCCCATGCCCCAGGGCGACCTCCAGGCCATGGGCCAGGGCCAG
ATAGGCCAAATGGGGCAGGTACCCATGCCGCCACAGATGGGCCAACAACAGCAGCAACAG
ATGCACCCCCAACACATGGCGCCTGGCCCCGCAGGCCATGTGCCCTCGCCCATGATGTCG
CATCACGGAGCACCCCATCCTCATGCAGCCTACCCCCAGATGTACGACTACCAGTACCCT
CCCGGCCAACCCCAGCAGCAGCCACCACCTCAACAGGCCCAGCAGCAGCTGCACCACTAC
TCGTCAGAGGAGTCGTTGCCGTCGTCGGTCAACTCGTCCCAGACGTCGCTGCAAACAGCA
TATTCGCCCCAGGTGGGCAACATGCAGCGTAAGCGACGACCCACGCCCATCTCCACGGAG
CAGCAACAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCATCAGCCACAGCCACCGCAT
CAACAGCAGCAGCAGCAGCAGCAGGGTCCCCCTTCGCCAACATACCCAACTACCCCGACG
CAGTACTCGACCCACTCCAACCATAGCTCCATTGCCGGAATCTCCATTTCGGACATGCCG
CCAGTCATGGCTGGACAGCGGCCTCCATCTCTAGGCGGCGACGGCGACGCAGCCTCTGTG
TTCTCCTCGCCCTTCCAGAGTCGTGGCCACCACGTCCGGGCGTCGGTGTCGTCCACGAAC
TCACTCACGTCGGCCTACAACTACCCCGTGCATTCGTCCAACCTGACGACCCCCGTGAGC
ACGCACTCCGCGTCCAACCAGCCCGGCAACACGAACTCGTGGCTATCGTCGGTGCTGTGT
TCGGGCCAGGACGGCACCGCCTCGAACCGTCACTCGTCCGCGTCGTCCACCTCTGCGTTC
TCCAACTCCCCCCAGCCCGACGACAACCGACCACGAACCTGGGGCCCCTCGACCAACACA
AGCTCGATCGCCGGCAACGCATCACCGCACCAGCAGTACCGCGGCTCAGGTATTATGACG
GGCGATCCCGGCTTTGATTCTCACTCGGGCCGACAGTCGCTCTCGTCTCTGGTTATCAAC
GAAAGCATGGACGAGTCGGACGACGACATGAGCGGCAGCGGGGGCTCCAGCGGCAGCGGC
GTCGCACCTCTGCCCCCCAACAAGGACAAGCCACTGCCGCCATTCTCATCGCTGTTCAAC
GGCGCCAACGGGCCCAACTCAGCCAACCGCCCTCAGATATCCGTCAACAAAAGTTACACA
AAGAACCTCATCCTGCCGCGGCCCGACTCGTACCCGCCCAAACCTCCGTCCGCACAGGGT
GGAGGGCCCACCGAGTTTGGCGACTTTTCGTCGTCGCATGTTTTGCCTATGGCGGACATG
CGGCCTGTTGTGGGCCAGCCGCCTCAAGGCCAGAAGGACAAGCCCCTGCCTCCTCTTCCT
GTGGAGGCCGACGATGTGGAGATGAGCGATGCTCCTCAGCGGGGCGGTATGGATTACCTG
CTCGAGGCAGCCAGTTTGTCCTCGAGGGCGTAAGACAGTGAGCATGAATGGCCGAGTAGC
GCCAGCGGTGCATACAGTGGTACAAATACAAGGGTACTACTACAGTTTCCAGGACGATGA
TTTTGGGCGGGTCACCAGTTTTCATTTGGACCTGCCTAATCTGGATCTCTTGCTCTGGAA
TAGGGAATATGGGAATTGTCTAGGCGTTTTGGATCGAGCTGATTCGATTCGGCGTGCTGG
ACCACCGGGTCACCCTCTCTTTATTTATATTAGGTGGTCGAGCATTAGTCGTCACCGTTG
AAAATTTAGACATCAGGTTTTCGTCTGAAAGGACCGTGATCAGGGCCCAGGCTCTGGTTG
CATCTTGTACAGTAATACAGTAATTGAGTGTATGAGGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22176g_CDS-001

Protein length: 591 aa.
Product: Conserved hypothetical protein

>YALI0B22176g_CDS-001 MNSPPPVPKKTKTKYPKIFQCTGYGDCKMTFTRSEHLARHIRKHTGERPFRCHCGKTFSR
LDNLRQHIQTVHANDHHILHAPLPPPPMPQGDLQAMGQGQIGQMGQVPMPPQMGQQQQQQ
MHPQHMAPGPAGHVPSPMMSHHGAPHPHAAYPQMYDYQYPPGQPQQQPPPQQAQQQLHHY
SSEESLPSSVNSSQTSLQTAYSPQVGNMQRKRRPTPISTEQQQQQQQQQQQQQHQPQPPH
QQQQQQQQGPPSPTYPTTPTQYSTHSNHSSIAGISISDMPPVMAGQRPPSLGGDGDAASV
FSSPFQSRGHHVRASVSSTNSLTSAYNYPVHSSNLTTPVSTHSASNQPGNTNSWLSSVLC
SGQDGTASNRHSSASSTSAFSNSPQPDDNRPRTWGPSTNTSSIAGNASPHQQYRGSGIMT
GDPGFDSHSGRQSLSSLVINESMDESDDDMSGSGGSSGSGVAPLPPNKDKPLPPFSSLFN
GANGPNSANRPQISVNKSYTKNLILPRPDSYPPKPPSAQGGGPTEFGDFSSSHVLPMADM
RPVVGQPPQGQKDKPLPPLPVEADDVEMSDAPQRGGMDYLLEAASLSSRA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG