YALI0B21406g

Overview

Description some similarities with uniprot|P07834 Saccharomyces cerevisiae YFL009W CDC4 F-box protein required for G1/S and G2/M transition
Locus type CDS
Locus tag YALI0B21406g

Location

Species Yarrowia lipolytica Positions 2806053..2807203
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1151 (nuc.)
Previous locus YALI0B21384g Next locus YALI0B21428g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21406g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21406gYALI0B21406g_mRNA-001YALI0B21406g_CDS-001

Nucleotide sequence

 

>YALI0B21406g
ATGCCGTCTCCTCCCCACGATCGGCTAAACGACTCAATTGGCTCAATTGACCCCTGGTTG
GCCCCCAAGACCAAGTTCCACACCGTCACGGTGCGCTCCGAGCATTCCATCATCACCTGT
CTGCAGGTGACCCAAGATTACATCATTGCCGCTTGCGAGACGCCGGAAATCACCGTGTAC
AGCAAAACCGGCGTGGTAATTCGTCGACTCGATGGTCACTCGGACGGCGTCTGGGCCATG
CATTTCGCACACAACCTGCTGGCCACAGGCGGCTCGGGCAAAGACTCGGACGTACGGGTA
TGGAAGGTGGAGACCGGACGGTGTGTAGCGGTGCTCAAGGGCAATAAAAAGACGGTGCGG
TGCGTGAGGGTGGCTCGCGACGGCAGAGGAAAGCTAATTGTTGTCAGTGGAGCCCGCGAC
AATACCGTACGGGTCTGGGATCTGTCCACGGCCGATTCCAGTGGTAGCAGCAACCTGGAG
CCCAAACTTCCCTCGGCAACTTTTAGGGGACACAAGGACACGGTACGTTGCCTGGACAGC
TACGAAAACACAATCGTGTCCGGTTCGTATGACGGGACCGTGCGTGTGTGGTCTCTGGAC
ACCCGTTCATGTCTCCATGTTCTGGATGGTCATTCGGACCGAGTATTTGCAGCTATCATA
GACCCGCAGCGAAAGAGATGCATTTCCGCGTCTCGGGACACAACAGCCCGCATCTGGTCG
CTGGAAACAGGCCAGTGTCTGCACATTCTCAAGGGCCACACTAGCATAGTCTACATGGTG
GAGTTAACTCCAGACTATTCGCATATTGTGACGGGCTCTTCAGACGGGACACTAAGAGTA
TGGGACCCAAGTGGGGCACTAGTTCACACTCTTTCAGGCCACAAATCGCCCGTTTCTGCC
ATGCAAGTGGACAATGACAAGATTGTGTCATCGGCCACCAACATGACGGTCAAGCTGTGG
GATCTGCAAAAGGGCGAGTTCATCCGCAATCTGGTGAGCTTCCCTACGTTCAGCTCCTCG
GAGAGCGTGTGGCATGTGGATTTCAATGGTAATGTGATTGTGGTTGCGTACTCTCGGGAG
GGGGCTTTTCTGGACGTGATTGAGCGGGTCCCCTAGGTTTATATACAAAAATACTAACAT
TACTTTCTTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21406g_CDS-001

Protein length: 372 aa.
Product: Conserved hypothetical protein

>YALI0B21406g_CDS-001 MPSPPHDRLNDSIGSIDPWLAPKTKFHTVTVRSEHSIITCLQVTQDYIIAACETPEITVY
SKTGVVIRRLDGHSDGVWAMHFAHNLLATGGSGKDSDVRVWKVETGRCVAVLKGNKKTVR
CVRVARDGRGKLIVVSGARDNTVRVWDLSTADSSGSSNLEPKLPSATFRGHKDTVRCLDS
YENTIVSGSYDGTVRVWSLDTRSCLHVLDGHSDRVFAAIIDPQRKRCISASRDTTARIWS
LETGQCLHILKGHTSIVYMVELTPDYSHIVTGSSDGTLRVWDPSGALVHTLSGHKSPVSA
MQVDNDKIVSSATNMTVKLWDLQKGEFIRNLVSFPTFSSSESVWHVDFNGNVIVVAYSRE
GAFLDVIERVP*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG