YALI0B21384g

Overview

Description weakly similar to uniprot|O42184 Gallus gallus Restin (Cytoplasmic linker protein-170) (CLIP-170)
Locus type CDS
Locus tag YALI0B21384g

Location

Species Yarrowia lipolytica Positions 2802781..2805029
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 2249 (nuc.)
Previous locus YALI0B21362g Next locus YALI0B21406g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B21384g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B21384gYALI0B21384g_mRNA-001YALI0B21384g_CDS-001

Nucleotide sequence

 

>YALI0B21384g
ATGAACACCATCAAAGTCGGCGACCAGGTGACCCTGCCGGAAGGCCAGCAGGGCATGGTC
CGATTTGTTGGCCGAGTGGACAACAAGCCAGGCGAGTTTGCAGGTATCGAACTGCTCAAG
GGGTGGGAATCACATGGACGACACTCAGGAGTGTACGGAGGCGTGAGCTACTTCCGCACT
GAAACCCCCAACACTGGTCTGTTCATTTCGTATCCGAAACTGGTTGCCCTGAACAACCAC
AGAGGCGGTACGAGCACCGTAGGCTCGTTGCCCGGATCCCCCATTTTTGCCACGCCAAAG
GGCCGACCTAGTCATATTACTACTCCCCGAACAATGCCCTTGCGCCACTCAATGATTCCC
AGCTCGCCTATCAGTGACCGGGGCGGTCCGTTCGAGTCTCCTTCTAAACGGCGGGTCTCT
GGAGTAATCAAATCTCGAGTCAGCTCGGTCAACTCTACAGGCACCATGAACACTTCTCTG
AACAGCAGTATCTCGGGTATTTCCGAAACTATGGCACCTTCCCATGAACTCAAGGAGCTC
AAGGATGAGGTCGAGTCGCTCAAGATGGCCATCAGGGACAGAGATGGAATCATTGAGGAG
GCTGAGAGCTCGCTCAACCAATTCTCGGAACTCGTGTCTCGAAATGAGCAGCTGGTCAGC
GAGCTCGAAATGAAAGACAGAAAGATCTCGGATCTGCAGAACGACGTGTCCTCCAAACGA
CGCGAGTTCAGAGACACAATTGACGCTCTGGAGGCCGAGTACATGCACTCATCACAGGAG
TACCAAAAGGAGGTGGAGCAGCTCAGAGCCAACCTGGGACATGCGCATACCGTCAATGAG
ACCATTGTGGAAATGGAGAGCATGGTGGCCAGTCTCGAGAGCGGACTACGAATCTCAAAG
GTCAACGAGCAGGAGGCCAAGGAGAGGCTGGGGCTCATGGCTGACATTGAGAACCGTTTA
CTCGAAAAGGAACAGGAGCTGGCTGCCGTAAAGGAGCGTCTTGACATTACAAAGGGCCAG
CTTGGAGGAGGCGATGGTGACTCAAAACTCAAGGAAGAATTGGACGCTGTTAAGAAGGAG
CTTGCTGAGTCGAAGCGGGAGCTTGAGGCTGCTAAGAATGAGGTTACTTCCCAAAAGACT
TTGTCGAGAGACATGGGTGACTCTGAGGAGTTAGAAGAGGTCAAGAAGCAGCTTGCTGAG
ACCAAGAAGCAGCTGCAAGAGCTCCAGTCAGTTGATGCCACTGACATGTCTTCTGAAGTG
GCTGACCTCAAGAAGGAGCTTGCCCAGACTCAAGAAATGTCGCTCAACGAGCAGGACCAG
AGCATGAAGACCATTGATACTCTCCGAAAGCAGATTTCGGAAATGAAACAGCAGCTCAAG
GAGAAGAATGTTCAGCTTGGGGAACATCATGTTGGTGGGTCATCTCCTACCAAAGAGCCT
CAGGCTGATAAGGGTCTGGCCATTGCCAACAAGAAGATTGCCAACCTCGAGAAAGAGAAG
ATGTACCTTAGTGAGGAGGCCAACGAGATTCGCTTCCAGATGTCCGAGCTCAAAAAGAAG
TTTTACGGTCTTGAAGAAGAGCTCCGAGAGGCCAAGGAGGCGTTATCCAACAACTACAGC
AACGATACCAACGACAAGAATGGCGCTTCTGAAGCTGGAAACGGAAGCGTTCACCTTGTG
GACAATGAGAAACATATCAAGCTTGCTCAGGACTACGACAAGCTGTTCGAGGATCACAAC
AAGCTCACAGAAAAACATGAGGATCTTAGCTTGGAGCTGGAAGATCTCAAACTGCAACTG
GAGGAGTCTAAGCTCATCGCTAAGGACTCCAAGGATGCCGCTGAGACTGCTGCTCCCAAC
TCTAGTGCCGAGGCTGAAGTCAAGATGCTGTCTGCTCAGGTCTCGGAGTTGAAGCAGAGT
CTCGATAAGGTGTCTTCTGCCAAACACAAGCTCTCCCAGGAGGTGGAGAAACTGGAATCG
GAACTGGAAACCAAGATTCTCAAAGAGTATGAGTTGGAAAAGGAGCTTGAAAATGCGAAG
CGAGCCAGCAATCAAGGCGATGGCTCTGTGCATGTCGCTGGGGATGACGGAGACCATTCT
CCGTCTACTCCATCGAAAAACAGCGACCCTGCGGCTGGCCGAGAGCTATGGTGCGGTCTC
TGTGAGCGACCTGGTCATGAGAGCATTTCTTGTCCTTTTGAGAACGAAGAGTTTTAGCAT
GTATGATAATGATTGATAGTGTATATATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B21384g_CDS-001

Protein length: 739 aa.
Product: Conserved hypothetical protein

>YALI0B21384g_CDS-001 MNTIKVGDQVTLPEGQQGMVRFVGRVDNKPGEFAGIELLKGWESHGRHSGVYGGVSYFRT
ETPNTGLFISYPKLVALNNHRGGTSTVGSLPGSPIFATPKGRPSHITTPRTMPLRHSMIP
SSPISDRGGPFESPSKRRVSGVIKSRVSSVNSTGTMNTSLNSSISGISETMAPSHELKEL
KDEVESLKMAIRDRDGIIEEAESSLNQFSELVSRNEQLVSELEMKDRKISDLQNDVSSKR
REFRDTIDALEAEYMHSSQEYQKEVEQLRANLGHAHTVNETIVEMESMVASLESGLRISK
VNEQEAKERLGLMADIENRLLEKEQELAAVKERLDITKGQLGGGDGDSKLKEELDAVKKE
LAESKRELEAAKNEVTSQKTLSRDMGDSEELEEVKKQLAETKKQLQELQSVDATDMSSEV
ADLKKELAQTQEMSLNEQDQSMKTIDTLRKQISEMKQQLKEKNVQLGEHHVGGSSPTKEP
QADKGLAIANKKIANLEKEKMYLSEEANEIRFQMSELKKKFYGLEEELREAKEALSNNYS
NDTNDKNGASEAGNGSVHLVDNEKHIKLAQDYDKLFEDHNKLTEKHEDLSLELEDLKLQL
EESKLIAKDSKDAAETAAPNSSAEAEVKMLSAQVSELKQSLDKVSSAKHKLSQEVEKLES
ELETKILKEYELEKELENAKRASNQGDGSVHVAGDDGDHSPSTPSKNSDPAAGRELWCGL
CERPGHESISCPFENEEF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG