YALI0B20878g

Overview

Description weakly similar to uniprot|Q12270 Saccharomyces cerevisiae YPL246C RBD2 Possible rhomboid protease
Locus type CDS
Locus tag YALI0B20878g

Location

Species Yarrowia lipolytica Positions 2749453..2750507
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1055 (nuc.)
Previous locus YALI0B20856g Next locus YALI0B20900g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20878g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20878gYALI0B20878g_mRNA-001YALI0B20878g_CDS-001

Nucleotide sequence

 

>YALI0B20878g
ATGGCCCAGTTCCCGCTGTTTCAGAAATTCCAAAAGGCGATACAGCACCCGCCGGCCCTG
TCGCTTGGGCTGCCCATTTTTCTGACCGTCATTTTCCTGTTGTCCCAGCGATATGTGTGG
ATTGAGGACGACCTGGAGCTGCGAAGCACCGCCCTGACCAATTTCGAACGTGAGTACACC
GCAACAACACACCACTATTTTCCCCCTCGCTAACTAGTCAACCGAATCTCATTCTACCCC
CTGGTCCATGCCACCTGGTTCCATCTGCTGCTCAATCTTGTGGCGCTACAGCCCATTGTG
TCGCAGTTTGAGCGAGTCAATGGAACTGTGCGAACCGGAATCGTGCTCAACATTCTCGCT
GTTGTCACTGCCATTCCCTGGTGTCTGTTGTCTATCGGCTTCTTCCCCGATGAGGCTGTC
CTGGGCTCCTCCGCCTGGATCTTCTCCTTCATGGGATACTGGGCCATCCGGGAGTCCTCC
AAGCAGCCTACCACCCAGCTGGCCCCCAACCTCGTGGTGCCCACTTGGCTTCTACCCATC
ATCTACCTGGTTGTCATTGCCATTGTCATCCCCAGCTCTTCCTTCATTGGCCATCTGCTG
GGACTGATTGCTGGCTGGATGATGGCTCTGGGCTACCTGGACGTACTCATTGAGCCTTCG
TCCAAGGTGGTGCTCTGGATCGAGAACAAGATCTCCAGAGTCATTGACCTGATCCCCTCG
TCCATCGTCACTTTCTACCGAGAAGAGGGCGCTTTGGACACTCGAGCTGCCGCTCGAGCA
GACACCAACCGGTCCCTGTCCGTGTCTGGCGGCAACTTCCTGGGCTTCCAGGCCAACTCC
AGCCAGGCCGATCTCGAGGCCGGTACCCGGTCTCGAGGCAACAGCAGCGTTGACCCCACC
ACTTCTTTCCCTGGAACGGGCCAGACTCTTGGTACCCAGTAAAGGACGATACCAAAATGA
ACGTAGAACATGTAAACATGTAATGAGCCATGACCTTTTAAGTGAGTTACAGGTGTAGGG
TGTTTGTGCGACTGGTGTAATACATGTACACAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20878g_CDS-001

Protein length: 298 aa.
Product: Conserved hypothetical protein

>YALI0B20878g_CDS-001 MAQFPLFQKFQKAIQHPPALSLGLPIFLTVIFLLSQRYVWIEDDLELRSTALTNFELNRI
SFYPLVHATWFHLLLNLVALQPIVSQFERVNGTVRTGIVLNILAVVTAIPWCLLSIGFFP
DEAVLGSSAWIFSFMGYWAIRESSKQPTTQLAPNLVVPTWLLPIIYLVVIAIVIPSSSFI
GHLLGLIAGWMMALGYLDVLIEPSSKVVLWIENKISRVIDLIPSSIVTFYREEGALDTRA
AARADTNRSLSVSGGNFLGFQANSSQADLEAGTRSRGNSSVDPTTSFPGTGQTLGTQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG