YALI0B20856g

Overview

Description similar to uniprot|Q6BVY9 Debaryomyces hansenii DEHA2B15642p
Locus type CDS
Locus tag YALI0B20856g

Location

Species Yarrowia lipolytica Positions 2746914..2748417
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1504 (nuc.)
Previous locus YALI0B20834g Next locus YALI0B20878g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20856g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20856gYALI0B20856g_mRNA-001YALI0B20856g_CDS-001

Nucleotide sequence

 

>YALI0B20856g
ATGCACAGTCTACTGCGAGCAGCCCAGATTGCACGGGTGGCACGTCCCGGTGTCAAGCGG
GCCATGACCCCCGCCGTGCGATTCTACTCGGACAAAAAAACCGAGAAATCCGACCAACCG
TTCCAGAGCTCTTTGCTGAACGACGATTTGCTGGCCCAGGCCGGTATGGACGTTGATGAG
TCCAAGGGCAAGAGCAAGCCTGCTGCTGAGGGCAAGTCCGAGGGTGCTGCCGAGGGAGCT
ACTGAGGACGATGTCACAGACGAGCAGCGAGCCCGATGGGCCGGAACTGCCAAGAAGTCC
ACCGACCAGACCTCCAAGCAGGAGTCTCGAGAGCGAATTGCCGGCTACGGATACTACGCC
TTCTTTGCTGGATCAGCAGCTTTCGCCGCCTACCTGGCCCGAGACTGGGACAATGAGGAG
GACAAGAAGAAGCATGATACCATTGGCCAGGGATACACCCCCATGCTCATGTGGGCCCGT
CTCAAGGCTCGAATCGGAGACACCTTTTCCTTCTACCGAGACCCCGTGGCTCCCGTTCTT
CTCCCCGATCCCCCTGCTCCCCCGTACCAGCGACCTTTGACGCTTGTTATTGCCCTCGAC
GATCTGCTTGTCCACCAGGAGTGGAGCAGAGAGCATGGCTGGCGAGTGGCAAAGCGACCT
GGCGTTGACTACTTCCTGGGCTACCTCGGCCAGTACTATGAGATTGTTCTTTTCTCTTCT
CAGTACATGGCCAACTGCGAGAAGCTCATCATGAAGCTTGATCCCTACCACGCCTGGTTC
TCCCACGTTCTGACCCGAGAGCACACCACTTACGAGGACGGTAAGCTGGTCAAGGACCTG
TCTCTGATGAACCGAGATATGGGCAAGATCATCATCATCGACCCCGATACCGGATGCACC
ATGAAGCAGCCCGAGAACTCCATCCCCATCGAGCCCTGGAAGGGAACTCCCGGCGACAAG
GAGCTGGTCAAGTTGATCCCCTTCCTGGAATGGCTGGTGTCTCAGAACGTGAACGACGTT
CGACCCATTCTTAAGGCCTTTGATGGCACCTATCTGCCTGACGAGTTCACCCGACGAGAG
GCCATTGCCCGAGAAAAGTTCGAAAAGGACTGGTACGCCAAGCACGGAAAGGACGGCCAG
TGGGCCTCCAAGTTCCTGGGTGTCTCCGAGCCCAAGCAGCAGAAGCCTCTGATGCCCCAC
GACGTGATGCGACGAGAGGGCCAGAAGCAGTACCAGAAGTTCCTGGAGTACCTGGCCGTT
GAGGGCCCCAAGCTCAAGGCCGAGGAGGAGCGAATGATTGCTGAGCAGAAGGCTATGGGA
CCTAAGAACCTGTCGGAGGCTGTCTCCAGCATTGGTTCTCTACCTCCTGTGCCCCAGCAG
CCCACTGAGCCCAAAGCTTAGATGTATATAGTATGAGTTAACGTGGCACGATGAGTGATA
GAGCCATGAGCGAGCCATGTGTGAGCCATGTGTGAAGCGAATGGTGAAGCGAATGACAAC
GCGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20856g_CDS-001

Protein length: 467 aa.
Product: Conserved hypothetical protein

>YALI0B20856g_CDS-001 MHSLLRAAQIARVARPGVKRAMTPAVRFYSDKKTEKSDQPFQSSLLNDDLLAQAGMDVDE
SKGKSKPAAEGKSEGAAEGATEDDVTDEQRARWAGTAKKSTDQTSKQESRERIAGYGYYA
FFAGSAAFAAYLARDWDNEEDKKKHDTIGQGYTPMLMWARLKARIGDTFSFYRDPVAPVL
LPDPPAPPYQRPLTLVIALDDLLVHQEWSREHGWRVAKRPGVDYFLGYLGQYYEIVLFSS
QYMANCEKLIMKLDPYHAWFSHVLTREHTTYEDGKLVKDLSLMNRDMGKIIIIDPDTGCT
MKQPENSIPIEPWKGTPGDKELVKLIPFLEWLVSQNVNDVRPILKAFDGTYLPDEFTRRE
AIAREKFEKDWYAKHGKDGQWASKFLGVSEPKQQKPLMPHDVMRREGQKQYQKFLEYLAV
EGPKLKAEEERMIAEQKAMGPKNLSEAVSSIGSLPPVPQQPTEPKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG