YALI0B20658g

Overview

Description weakly similar to uniprot|P33309 Saccharomyces cerevisiae YNL001W (ohnolog of YCL001W-B) DOM34 functions in protein translation to promote G1 progression and differentiation
Locus type CDS
Locus tag YALI0B20658g

Location

Species Yarrowia lipolytica Positions 2721070..2722385
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1316 (nuc.)
Previous locus YALI0B20636g Next locus YALI0B20680g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20658g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20658gYALI0B20658g_mRNA-001YALI0B20658g_CDS-001

Nucleotide sequence

 

>YALI0B20658g
ATGCGTCTCATCTCCAAGGGACTGAAAAACAAGCTGGAGTACAAAAAGCTCGCTCTGGAT
TCCACTGACGACCTGTATGCGCTGACCAACGTGATCCAAAGAGGCGATTTGGTCGAGGCC
AAGACACTGCGAGCAGTTCCACAAACCACAGGCGCCTTTGATGACGAGCAGATCCAGGGC
AATGCAGGCAAGAAGAAGGTGCTTCGAAAGCTCATTTACATCACTGTTCGTGCCCAGAAG
ATTGTTTTCGACGGCGAGGAAATCCGAATCACAGGCGTCATTACCGATGCTGGCCACCAC
GAGTCTCTCAAAACGAAATATCACACGTTGGCTCTTACACCAGGCGATGAGGTGACCGTG
ATTAAGGAGTTCTGGGATTTCTTTGCGCTCCAGACGCTCGACCAGTACGTGGGAGCAGAC
ACAATGAGCGCTCTTGCTATGGTGTTCAACTCCACTGGCAAGTTCACCATTTACGAGCTG
CGTCATAGTGTCACTCGAGTGCTGGTTCAGGGATACAAGGCCATTCCTCGAAAATACGAC
GGACAGGGCTCGGTCGGAAAGACTCGAGGTAAGCAATACAACGACTTCTTTAACGTGGCC
AAGGAAACGCTGCTGCGAACCATTGAAAACAGATGCAAAGCCGACTGGACTATTCCCGTG
CTGCTCATCTCCATGCCTTACATGAACAAGCTCTTCTCGGAGTATTTCAAGGCATGGGCT
GTGGATAATAAGGTGAAAACAGCCATCCAGCTGCAACAGGGCTTTATCACACTGGAAACT
TCGTCCGAAGGCAAGACTGCTATTCGAGAGGCTCTCAAGTCAATCTCCTACAAATCCGCA
CTCAACAAACTGGCCATTGCTGCTGACGGAAACGAAATGGACCAGTTCCAACGCATGTTC
CATACAGACCCAGATCGAGTGTGGTACGGAGAAAAGCACGTGGATTACGCTCTCGAAATG
AGCGCTGTTTCTGTGTTGTTCCTGTCGTCCAACTTTGTGCGTGGATTCGATCACGCTAAG
AGATCCAGATACGCTGAGGCCACTCAGGCTGTGCAGCAGAACGGAGGCAAGGTCTTTATG
TATTCGCATCTGCAGGACTCGGGGCGTCAAATTGACGCCCTGGGAGGTATTGCTGCTATT
CTGCGGTTTCCTCTTAACGACGATGCTGTTGAGCTGGAGGACGCCGAGCTCAGTGACTAT
TCTGACGACGAGTGATAGACATGTATATAGTATTGGGAGATAGATGCATGGGAGATGGAT
GCCATGACGTTCGAGAATGAATTGAATAAAACATTAATGAGCTCCAAGCTACTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20658g_CDS-001

Protein length: 405 aa.
Product: Conserved hypothetical protein

>YALI0B20658g_CDS-001 MRLISKGLKNKLEYKKLALDSTDDLYALTNVIQRGDLVEAKTLRAVPQTTGAFDDEQIQG
NAGKKKVLRKLIYITVRAQKIVFDGEEIRITGVITDAGHHESLKTKYHTLALTPGDEVTV
IKEFWDFFALQTLDQYVGADTMSALAMVFNSTGKFTIYELRHSVTRVLVQGYKAIPRKYD
GQGSVGKTRGKQYNDFFNVAKETLLRTIENRCKADWTIPVLLISMPYMNKLFSEYFKAWA
VDNKVKTAIQLQQGFITLETSSEGKTAIREALKSISYKSALNKLAIAADGNEMDQFQRMF
HTDPDRVWYGEKHVDYALEMSAVSVLFLSSNFVRGFDHAKRSRYAEATQAVQQNGGKVFM
YSHLQDSGRQIDALGGIAAILRFPLNDDAVELEDAELSDYSDDE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG