YALI0B20482g

Overview

Description highly similar to uniprot|P50085 Saccharomyces cerevisiae YGR231c PHB2 Prohibitin
Locus type CDS
Locus tag YALI0B20482g

Location

Species Yarrowia lipolytica Positions 2699397..2700473
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1077 (nuc.)
Previous locus YALI0B20460g Next locus YALI0B20504g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20482g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20482gYALI0B20482g_mRNA-001YALI0B20482g_CDS-001

Nucleotide sequence

 

>YALI0B20482g
ATGAACAACCCCAACTGGAAAAAATTCAGCAACCAGCTCAACCAGCTGCAGCGACAGGCC
CAGAAGGGTGCCGGAGGTGCCGGAGGCCCCAAGTTTGTCGGCGTCGGAGGCCTGGTCGTT
CTGGCAATTGCTGCCGCCACCATCAACTCGTCTCTTTTCAACGTGGATGGTGGTTCTCGA
GCCATCATGTACAACCGAATCGGCGGTATCTCTCCCCGAATTTACCCCGAGGGAACCCAC
ATTGCCATTCCCTGGTTCCAGAGCCCCATCATCTACGACGTGCGAGCCAAGCCTCGAAAT
GTGGCTTCTCTGACCGGTACCAAGGATTTGCAGATGGTCAACATCACCTGCCGAGTGCTG
TCTCGACCCAGCATCTCGGCTCTGCCTACTATCTACCAGACCCTTGGCAAGGACTACGAC
GAGCGAGTTCTGCCCTCTCTGGTCAACGAGGTGCTCAAGTCTGTGGTGGCCCAATTCAAC
GCCTCCCAGCTGATCACCCAGCGAGAGCGAGTCTCCCGGTTGGTCAAGGAGCAACTCATC
AAGCGAGCCTCCAAGTTCAACATCCTGCTGGATGACGTGTCACTCACATACATGACCTTC
TCGCCCGAGTTCACCGCCGCCGTCGAGGCCAAGCAGATTGCCCAGCAGGAGGCCCAGCGA
GCCGCCTTCATTGTCGACCGAGCTCGACAGGAGAAGCAGGGAGCCATTGTCAAGGCCCAG
GGAGAGGCCCGATCCGCCGAGCTGATTGGTGATGCCATCAAGAAGTCCAAGGACTACGTT
GAGCTCAAACGTCTGGATACCGCCCGAGAGATTGCCCACGTGCTTGCCAAGTCCGGCAAC
AAGATCATGCTGGATAACGACTCTCTGCTTCTCAACGTGGCTAACGATTTTAGATCGAAG
AAGTAAGAGGTTTAAAGGACCTTTTTCGCCCCTCGAAATGTTACCTAGCTTTGGCAAGGT
GCACTCGCAGACTCTTCATCTTGTGTAAATAGATAATTAACTGAAATTAGAAAAATATGA
AGGTAGGTGACAGTGGATGTATACCGTTCCCATACTTATAACGACATAGTGTTTCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20482g_CDS-001

Protein length: 302 aa.
Product: Subunit of the prohibitin complex (Phb1p-Phb2p), putative

>YALI0B20482g_CDS-001 MNNPNWKKFSNQLNQLQRQAQKGAGGAGGPKFVGVGGLVVLAIAAATINSSLFNVDGGSR
AIMYNRIGGISPRIYPEGTHIAIPWFQSPIIYDVRAKPRNVASLTGTKDLQMVNITCRVL
SRPSISALPTIYQTLGKDYDERVLPSLVNEVLKSVVAQFNASQLITQRERVSRLVKEQLI
KRASKFNILLDDVSLTYMTFSPEFTAAVEAKQIAQQEAQRAAFIVDRARQEKQGAIVKAQ
GEARSAELIGDAIKKSKDYVELKRLDTAREIAHVLAKSGNKIMLDNDSLLLNVANDFRSK
K*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG