YALI0B20438g

Overview

Description similar to uniprot|P42941 Saccharomyces cerevisiae YGR208W SER2 Phosphoserine phosphatase of the phosphoglycerate pathway, involved in serine and glycine biosynthesis
Locus type CDS
Locus tag YALI0B20438g

Location

Species Yarrowia lipolytica Positions 2695294..2696397
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1104 (nuc.)
Previous locus YALI0B20416g Next locus YALI0B20460g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20438g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20438gYALI0B20438g_mRNA-001YALI0B20438g_CDS-001

Nucleotide sequence

 

>YALI0B20438g
ATGACCAACCTCAGCTACGTGATTACTCTCATTGGAAAGAGCGACATTCCCGCGGAGTTC
ATTGCCTCCGTCCAGGAGATCTTCGCCAAGCTCTCTGTTGTTTCTCAGTTCGAGATCCAG
CTTGATGGTAGCCGGGTCCTCGACTACTCCGTTGAGATCCCCATCGGAGCTCTTGCCGAG
CTGAAGATTGATCTGTTCGACCTTTCTACCGGTTCTGGTGTTGACATCATTGTTCAACCC
ACCGAGAACCGACTCAAGAAGCTGTTCATCTTCGACATGGACTCCACTCTGATCGAGCAG
GAGGTGATTGAGCTGATTGCCGCTCGAGCCAACGTTGAGGCCCAGGTTGCTGAGATTACC
GAGCGAGCCATGAACGGCGAGCTTGATTTTAACGCCTCTCTGGCAGAGCGAGTCGCTCTT
CTGAAGGGAATTGAGTCTACATCTCTGTTTGACGAGCTCAAGACCCAGCTGGTGTTCACC
AACGGAGTCAAGGAACTGTGCAAGGTCCTTGGAAACACTGGTGTTAAGATGGCTGTGCTG
TCTGGAGGTTTCACTCCCCTGGCCAAGTATGTGGCTGGAGAACTGGGACTTGATTACGCC
CATGCTAACAACCTTGAGGATGAGGACGGAAAACTCACTGGAAAGACCTATGGAGAGATT
GTCAACGGAGACAAGAAGGCCGAGTTGCTACAGCGAATTGCAGCCGAAAACAACATTGAG
CTCGACCAGGTGTGTGCTGTTGGAGACGGTGCTAACGATCTGCCCATGATGGGTGTTGCT
GGCTTTGGTATTGCCTGGAATGCCAAGCCTGTGGTCCAGGAGAAGGCCCCTAGCAGACTC
AACTCGGGATCATTAAGAGATGTTCTTTACATTCTGGGCTACTCTAAGGGAGAGCAGGAG
GAGCTCTTGAAGTGAGCAAACAATAGAAGGCGAGATTGAAGAACGAAGAGCCTACGACTA
CTTGTAGACAACGCTGACGAGTTTAGCTCATCTTTCAAACAATATCGCTGACAGTATATA
GTATTGATAATACGACATGATGGTATGGGGATCAATGAGAATATATGTTTCGGACAGAAC
CGAAGACACAGGTTGTTGATCATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20438g_CDS-001

Protein length: 305 aa.
Product: Phosphoserine phosphatase of the phosphoglycerate pathway, putative

>YALI0B20438g_CDS-001 MTNLSYVITLIGKSDIPAEFIASVQEIFAKLSVVSQFEIQLDGSRVLDYSVEIPIGALAE
LKIDLFDLSTGSGVDIIVQPTENRLKKLFIFDMDSTLIEQEVIELIAARANVEAQVAEIT
ERAMNGELDFNASLAERVALLKGIESTSLFDELKTQLVFTNGVKELCKVLGNTGVKMAVL
SGGFTPLAKYVAGELGLDYAHANNLEDEDGKLTGKTYGEIVNGDKKAELLQRIAAENNIE
LDQVCAVGDGANDLPMMGVAGFGIAWNAKPVVQEKAPSRLNSGSLRDVLYILGYSKGEQE
ELLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG