YALI0B19096g

Overview

Description weakly similar to uniprot|A5DXN0 Lodderomyces elongisporus hypothetical protein LELG_02117
Locus type CDS
Locus tag YALI0B19096g

Location

Species Yarrowia lipolytica Positions 2527267..2528784
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1518 (nuc.)
Previous locus YALI0B19074g Next locus YALI0B19118g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19096g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19096gYALI0B19096g_mRNA-001YALI0B19096g_CDS-001

Nucleotide sequence

 

>YALI0B19096g
ATGGTCAAGCGACGTCTAGAGAACGATCCTGAGACGTGCCACAAACGGCCCACGGCGTCC
CCACTAACCAGACTGCCGGCCGAGCTCAAAAATGCCATCTGTGACCTCCTGCCCAAACGC
GACATTAGAGCCGTGTCTCTGGTGAGTCACGATCTTCGCCACGCGGCGTGCGACAAGTTG
TTTGGTGACTTTTACCTGAGCTGGGACTCCTTGGCCCCCACCAGAGACTACCTGGCTTCT
GATTCGTGCGGCATAGCCGGATATATCCACACTCTGCACATCACCAAACATTCGTCCTAT
GCCGAGTGGCACTATCCTGAGCTGCTGACGGAGTTTATGTCGCTGTGTCCGCAGCTGTCC
GACGTGACAATGGTCATTTCGGGCTCTTCTGCGTGGCTCAAGTACGTGGGATGCGACCGA
GTGACTAACATGACTGTTATATCCGGTCAGGTGCAACGGCTCCAGACCTTCAACAACGTC
AACGCGCCAGCAAAACAAATCTCCTTTGACATCGACCATCTCGTGGGCTTTCCAGCTGTT
AAGACACTTGCCCTTGAGGGCTTCACAGTCCAGAGAGACTCGATTCTCAATAAGGATGGC
GTCCATGAGATCATTCCGCTGTCTAGAATCTCGGCAGACAAGGATGGAAGCACACCAGTG
ACGAGGCTGAGCCCGTCAAGAAACGAGACGGTGGCGGTCAAGAGACTGGTGTTGGAAAAT
TGCATTTGGCAGTATCCTTATGACGTTAAGGATTTCGGCAGTATTGAGGAGCTGGAGGTC
AGGTTGAGTAAGGGATACACGGTCTATTCACGTGAGTATAACTGGGCGTGCTAAATGCGC
TGAGAATCAAGTGCCACTCCATATGCTGAGGGTCATCATATCTGGGTCCAGAAATGTTTG
TGGCAATTCGTTTGCTTCTATCACACCCACACACCAGATACAACATACCCAACACAAAAT
CACAAAAGAAAAATTCCCAGGCATAAAGCTCCAAAAACTGGCTAAACTGACCACCCTGAT
CAGCCAGAAGTCCCAACCTCTTCTTTATTAACACAGACAACGAACGATTCCATTCATTCG
TTCTATCGCCACCTCCCACTGTCAGACGACTGACCATCGACCTACCCGTAGAGCCATATC
ACCAGCAGCTCTCGTGGACTCCTCTTAAGAGCCACAGATGCAAACAGTTGGAGTACTTGT
CCATTAAGGGCTTCCACCTACCCGGCATCCAGTTTGCCGCGGCGCTCCCTGCATCCCTTA
AACAGCTTCGTTTCGAAGTGGGACTCACGCAGGATAAAGAAATGTTCCATCGACTGGACG
CCCAGGCAGACAGCTACCGCGACACGTTCACGGCCAGCACGCGTGCGCGCACCCTCGACG
TGGAACTAGTCGGTAAGTTGGTTTCCATAGAACCCCCCACTTTTGCCCTACCCAACTACT
GACGCAGGTGTTATTGAAGGAGATAGATAGGCAGGATGTATACTAACTAATGATTAATGA
ATTTGCTATGACACGGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19096g_CDS-001

Protein length: 390 aa.
Product: Conserved hypothetical protein

>YALI0B19096g_CDS-001 MVKRRLENDPETCHKRPTASPLTRLPAELKNAICDLLPKRDIRAVSLVSHDLRHAACDKL
FGDFYLSWDSLAPTRDYLASDSCGIAGYIHTLHITKHSSYAEWHYPELLTEFMSLCPQLS
DVTMVISGSSAWLKYVGCDRVTNMTVISGQVQRLQTFNNVNAPAKQISFDIDHLVGFPAV
KTLALEGFTVQRDSILNKDGVHEIIPLSRISADKDGSTPVTRLSPSRNETVAVKRLVLEN
CIWQYPYDVKDFGSIEELEVRLSKGYTVYSHNERFHSFVLSPPPTVRRLTIDLPVEPYHQ
QLSWTPLKSHRCKQLEYLSIKGFHLPGIQFAAALPASLKQLRFEVGLTQDKEMFHRLDAQ
ADSYRDTFTASTRARTLDVELVGVIEGDR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG