YALI0B19074g - SLS2

Overview

Description uniprot|Q6CE27 Yarrowia lipolytica YALI0B19074g SLS2 Sls2 protein, synthetic lethal with 7SL RNA conditional mutation
Locus type CDS
Gene name SLS2
Locus tag YALI0B19074g

Location

Species Yarrowia lipolytica Positions 2523234..2526046
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 2813 (nuc.)
Previous locus YALI0B19052g Next locus YALI0B19096g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19074g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19074gYALI0B19074g_mRNA-001YALI0B19074g_CDS-001

Nucleotide sequence

 

>YALI0B19074g
ATGTCGACGTTAATGTGGTCGGCTGAGCAAAGCGCGGCGGCGGCGGCGGGCTCGCATCTC
CAGTCCGCAGCCGAATGGCCTGATCGTGTGCTTACTAATCTCATCCGGTACATGAGTCCG
CGGGACGTTGTGACCTTCGGTTCCACGTGCAAACGGATCCGACAAGTGTCCCTGCGGGAC
GACCTGTGGCAGTCGCGTCTCGAGGCTATGGATCTGTGGGACGACGCAGAGGCCAAGCGC
AAGAAAAACGATGAGTTCCATCAGCATGAAGAACAGGAGCTGGACAAGGAGGAAGAAGAG
GATATGACTGGAGCTGGACAGAAGAAGGAAGAAGATACACTGGTGGATCTGCTTGATTTG
AGTCCGACCAAGCCTGTCACGGCGACATCTACGCCCTACATGCCCCCGGCAGATTTGTCC
AACCAGCCAAATCCATTGACTCCCTTTGATGGCCTTGAAAGCACATACGGGAAGGCTCTG
GAGACCTATTCCTCGGTATATCGCAATCTTGCACCCTTCTACTATGACATGGTTCAATCT
GGAGCGTTCCAGGAACCGCTGCTGTTCAAATTGTACGATCAACCGGAGCACCAGGCTAGA
GCACTCGTCAACTTAAAACGACTGTCATACTCTCTGGGAGACAACGAATTTGAGGATGAG
AACCGAGATCAGCTGGCAAGTATTGCTGAGACGTTCGAGAATGCTGCACTGCGAGAATTC
GAACTGGGAATTGACGAGGGAGACTTTACACCTGACTCGAGAGTCAAGCGATACGCCCAA
GTGCTCAAACAACTAGGAGCTACAGAATCGTGTGTCGAGCTGTTCGTTCACAAACGAGCC
ATTGATGTTCCACATAGCCCTGCTATCCTTGGAGATAAGGGTATTAACATGACCGCTCTA
CAGAACCATCTAGATCTCGTGTCGAAAACTATAGCCCAACAAATGGAGGCTATTGATACC
GTGTTTGGGCTAGAGATTGACAATGTCAGCTACCTGTTTGCGAAAATCGTGCTGGAAGAT
GCAGTCATTGATACCATTAATCACGTGCTTGAAGCTGCTCGTGAGCAGGAGACAGTCTAC
TACCTTGATGCGGTCCCTGACATTTATGCCAAACTGCTGACTATCACTGACACTCTACCT
TCCTCCATTAACGGGCACCAGGACAAGTACAAGGGTGCCTTGAAACGTCTGCTGATTAGT
CAGTATGAGTTTCATGTCGATCAGTTCATGCAACTGGAGCTTGACTCGTTTGAGACCTAC
GCCAATGACCTGGTTGATTCCTGGGACAAGGAGACTCATGATAAGGAAATTGCCACGGAA
CATTACTATCTGAGTAATGTGACCAAGGAGAAGGATAAGCGGGACTTCTTATCGTCTTTC
AAGGACGTTCTAATGATGCCCATCAATGTTATTGGTGTGGGAAGTTCCAAGGACGCCAGC
AGGTCGGGGACACCGAACCCCAATGCCAACGGTAGCTCCTCCAAGTCAGGCACTCCTAAC
CCTGGAGCATCTCGCTCCGGCACTCCCAACCCCGACCAATCATCTGCTGATGGTCATCAC
GTGTCTTCTCCTCCTCCCGAGCTCGAGACAAACCTTCCCACCACAGAGTTGGACGCCAAG
GCCGCTATTATGAACGACCGTTTGCAGGGCATCAACTCGTTGTTTAACCTCGAGCTGGCT
CTCAACATCACCAAGGCTGGAAAGGCGTCTCTAGAGCGAATCAAGCGATTCCATGCTGCC
GGAGGACAGCTGGCCAAAGACTCCAAGGAGCAATGTGAGCGCGTGTTCGTATCTCTTATC
GATATTCTTGGTAAGCGGCATATCGGTGGTGGTTTCGACAAAGCTCTAGGACGTTTGGAT
TCGTATAAACCGCATAATCTCGGCTTTTTGGACGAAAAGAAGAGCAAGAAGGGCAAGAAG
GAGGAAGTCAAGGAGGAATCGTTGGAGGAGAAGAAGAAGAAGGAAATGGAAAAGAAGGGA
GGTCTCGAACCTCTCGTTGTCTTTGCTGAGTTGGTCAACATTGGAGATCTTATTCAGCAG
ATGATCCACGTCTTCTTCGAAGAGGAGCTGGCACAAAAGAAGTTCATCGATCGAAATGAC
TTTGTCTCTCCCTCGGTTCAGGCCAAAAAGAAGTTTGAGAAGCAGTTGGATGAATATGTG
GCTCGAGGTCTGAACCAGGGTATTGATGTTCTTTCCGACCAGATGGACTTCCTGTTTGTC
ACCACTCAACTGGGCTCGGATTTCAACCCCCTGCCTAACATGGAGCCCAATATGGGACCC
ACGGAGTGCGCAAAGGGGCTGGTTGACCTGTTGTCTGTTCACATGAAGATTCTGTCTGGA
AGTACTGAGAAAACTGTGCTGGATGTGTTCCAACAGGAACTGGGTATGCGGTTTTTTGCC
AGCATTTGCAAGCATCTCAAGAGAAAGACAATTTCTGTCGATGGAGCCATCACTGTCATT
TCTGACCTCAATTACTACTATTCGTTTGTGTTGGGACTGAAGCAAAGACCTCTCAACCAG
CCGTTTGCCGCCCTGAAGGAGGTTGGCCAGATGTATCTGATTGATACCAAGGATGCAAAG
GCCCTGGGCAAACTGCTGTCGGACATGAACCGGTTCAAGGGCGTGTTTCAACCTGAAGAG
ATTTACGAGTTTGCCCACTCTAGAGCAGATTGGGTGCTGGTGAAGAGAGAGGTGGAGAAG
GCGATGTATGGACTGGGTGTGGATTGTGTCATCTCGTAGAGCTCTTCACACCACACTTCT
AATGACACTAGTGTAAATAAAATAGTTCGCAATGATAGATATTCGACATAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19074g_CDS-001

Protein length: 913 aa.
Product: Sls2 protein, synthetic lethal with 7SL RNA conditional mutation
Gene: SLS2

>YALI0B19074g_CDS-001 MSTLMWSAEQSAAAAAGSHLQSAAEWPDRVLTNLIRYMSPRDVVTFGSTCKRIRQVSLRD
DLWQSRLEAMDLWDDAEAKRKKNDEFHQHEEQELDKEEEEDMTGAGQKKEEDTLVDLLDL
SPTKPVTATSTPYMPPADLSNQPNPLTPFDGLESTYGKALETYSSVYRNLAPFYYDMVQS
GAFQEPLLFKLYDQPEHQARALVNLKRLSYSLGDNEFEDENRDQLASIAETFENAALREF
ELGIDEGDFTPDSRVKRYAQVLKQLGATESCVELFVHKRAIDVPHSPAILGDKGINMTAL
QNHLDLVSKTIAQQMEAIDTVFGLEIDNVSYLFAKIVLEDAVIDTINHVLEAAREQETVY
YLDAVPDIYAKLLTITDTLPSSINGHQDKYKGALKRLLISQYEFHVDQFMQLELDSFETY
ANDLVDSWDKETHDKEIATEHYYLSNVTKEKDKRDFLSSFKDVLMMPINVIGVGSSKDAS
RSGTPNPNANGSSSKSGTPNPGASRSGTPNPDQSSADGHHVSSPPPELETNLPTTELDAK
AAIMNDRLQGINSLFNLELALNITKAGKASLERIKRFHAAGGQLAKDSKEQCERVFVSLI
DILGKRHIGGGFDKALGRLDSYKPHNLGFLDEKKSKKGKKEEVKEESLEEKKKKEMEKKG
GLEPLVVFAELVNIGDLIQQMIHVFFEEELAQKKFIDRNDFVSPSVQAKKKFEKQLDEYV
ARGLNQGIDVLSDQMDFLFVTTQLGSDFNPLPNMEPNMGPTECAKGLVDLLSVHMKILSG
STEKTVLDVFQQELGMRFFASICKHLKRKTISVDGAITVISDLNYYYSFVLGLKQRPLNQ
PFAALKEVGQMYLIDTKDAKALGKLLSDMNRFKGVFQPEEIYEFAHSRADWVLVKREVEK
AMYGLGVDCVIS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG