YALI0B02574g

Overview

Description similar to uniprot|P39925 Saccharomyces cerevisiae YER017C AFG3 Component, with Yta12p, of the mitochondrial inner membrane m-AAA protease that mediates degradation of misfolded or unassembled proteins and is also required for correct assembly of mitochondrial enzyme complexes
Locus type CDS
Locus tag YALI0B02574g

Location

Species Yarrowia lipolytica Positions 394317..396643
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 2327 (nuc.)
Previous locus YALI0B02552g Next locus YALI0B02596g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B02574g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B02574gYALI0B02574g_mRNA-001YALI0B02574g_CDS-001

Nucleotide sequence

 

>YALI0B02574g
ATGAACCCCAGCATCGTGTCGTTACGGACGCTACGAGTGGGTTTGCGAGTTGCCACGCGG
GCTCATACACTGCCCGTGGCCCAACGGCGGCTCTTCAGCTTTCAGACATCTTCTTCCTTG
CTTCGAAACTGGGTCTTCAACAAACCACAAAACGACAAGAAAGAGAAGGACGACAAAAAC
GCCCCAGGAGGAATGTGGTGGCAGAACCACCGCCAGGAGGGCGGTAACAACAACCAGGGA
GGCCAGGGTGGCGACGGCAAGGATCCTAAGAAGCCCAACCTGCCCATGGGCGAATCGATC
CTGACTAACCTGCTTGTGTTTGCTCTTCTGTCGTGGTATCTGTCTTCTCCTTCTAACAGC
GGCCCCAAGCTGTCGTGGCAGGAGTTCCAGAGTGGCTATTTGGAAAAGGGCATGGTCAAG
AAGATGACTGTCGAGAACGGCCAGCGGGTTGTGGCTGAGCTCACCTCCCCCGTGCAGCAG
CCCAACGGAACCACCACCTCCATTGTGGAGTTTGCCATTGGATCTGTCGAGTCCTTCGAG
CGACGAATGGAGGAGGCCCAGGACGCCCTCCACATCGCTGCTGCTGACCGAATCCCTATC
CACTACGTTCGACGATCTTCTCTGCTCGGAACTCTTCTTCCCCTGATCCCCACTATCCTC
ATGCTTGCCGGTTTCTTCTTCATCTCGCGTCTGGGAAGACAGGGCGGTAAGGGAGGCCCC
GGAGGAGGAGGAGGACTATTCGGTATGGGTAAGTCCAAGGCCAAGCTGTTCAACAAGGAG
ACCGATGTCAAGACTAACTTCTCCGATGTCGCTGGTATGGACGAGGCCAAGGTCGAGATC
ATGGAGTTTGTTAACTTCCTCAAGGACCCCAAGAAGTACGAGAAGCTTGGTGCCAAGATC
CCTCGTGGAGCTATCTTGTCCGGACCTCCGGGTACCGGTAAGACCCTTGTTGCCAAGGCC
ACTGCTGGTGAGGCCGGAGTGCCCTTCCTGTCTGTGTCCGGATCCGAGTTTATGGAAATG
TTTGTTGGTGTTGGAGCCTCCCGAGTGCGTGATCTGTTCAAGCAGGCCCGTCAGATGGCC
CCCTCTATTGTCTTCATCGATGAGATTGACGCCATTGGAAAGGCTCGAGGAGATGCTACG
CGAGGTGGAGGTAACGATGAGCGAGAAGCTACTCTGAACCAGCTTCTTGTTGAGATGGAC
GGTTTCGAGTCCTCTGACCACGTCGTTGTTCTTGCCGGTACTAACCGACCTGATGTTCTT
GATCCTGCTCTTCTGCGACCTGGCCGATTCGACCGACACATTTCCATCGACAACCCCACT
GTCGAGGGCCGAAAGGCTGTCTTTATGGTGCATCTCCAGAAGATTGTTACCGATCTGGAC
CGAGAGGATCTAGCCTCTCGACTGGCTGCCCTGACTCCCGGTTTCTCTGGCGCCAACGTT
GCCAACGTATGTAACGAGGCTGCTCTGATTGCAGCCCGTGCCGACGCCGACTCTGTTGAT
ATCAAGCATTTTGAGCAGGCCATTGAGCGAGTCATTGCTGGTCTGGAAAAGAAGACCATG
GTTTTCACGCCCGATGAGAAGAAGACCATTGCCTACCACGAGGCTGGACACGCCATCTGC
GGTTGGTTCCTCGAGCATGCCCATCCTCTTCTTAAGGTCTCCATCATCCCCCGAGGAAAG
GCTCTTGGATACGCCCAGTACCTTCCTCCGGATCTCAACCTGCTTTCTGAGGCCCAGATC
ACCGACCAGCTTGTCATGACTCTCGGTGGTCGAGTTTCTGAGGAGATTTACTTTGGTGAC
ATCACCAACGGAGCCGCCGACGATCTGCGAAAGGTGACACAGTATGCCACCTCCATGGTC
ACCAGCTTGGGCATGTCTCCCAAGATTGGTCCCGTCAACTTTGAGGTTGCCGAGGACGGA
TTCAACAAGCCCTACTCCGAGGAAACTGCCAACGTGATTGATCACGAGATTCGACGAATC
ATCTCCGAGGCTCACACAAAGTGCCACGAGCTGATCAGATCCAAGTCCAAGGAGATGGAC
CTGGTGGCTGAGGAGCTGCTGAAGAAGGAAGTCATCACTCGAGAAGACATGATCCGACTT
CTGGGCAAGCGGCCGTGGTCCGAGAAGAACGACGCTTTTGACAAGTACCTCGACAACAAG
GAGGTCAAGATGGCCGACAAGGCTCAGTCAGAGGCCAAGGAGATTGAGAAGGACGAGAAC
GAAGTCAAGAAGGACGATGAGGAGGAGAAGAAGGACGACTCCAAGGATGGTAAGGATAAG
GAGGAGAAATAAATGTACATATGTAAATAACTGACGTTGTTGAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B02574g_CDS-001

Protein length: 764 aa.
Product: Mitochondrial inner membrane m-AAA protease component, putative

>YALI0B02574g_CDS-001 MNPSIVSLRTLRVGLRVATRAHTLPVAQRRLFSFQTSSSLLRNWVFNKPQNDKKEKDDKN
APGGMWWQNHRQEGGNNNQGGQGGDGKDPKKPNLPMGESILTNLLVFALLSWYLSSPSNS
GPKLSWQEFQSGYLEKGMVKKMTVENGQRVVAELTSPVQQPNGTTTSIVEFAIGSVESFE
RRMEEAQDALHIAAADRIPIHYVRRSSLLGTLLPLIPTILMLAGFFFISRLGRQGGKGGP
GGGGGLFGMGKSKAKLFNKETDVKTNFSDVAGMDEAKVEIMEFVNFLKDPKKYEKLGAKI
PRGAILSGPPGTGKTLVAKATAGEAGVPFLSVSGSEFMEMFVGVGASRVRDLFKQARQMA
PSIVFIDEIDAIGKARGDATRGGGNDEREATLNQLLVEMDGFESSDHVVVLAGTNRPDVL
DPALLRPGRFDRHISIDNPTVEGRKAVFMVHLQKIVTDLDREDLASRLAALTPGFSGANV
ANVCNEAALIAARADADSVDIKHFEQAIERVIAGLEKKTMVFTPDEKKTIAYHEAGHAIC
GWFLEHAHPLLKVSIIPRGKALGYAQYLPPDLNLLSEAQITDQLVMTLGGRVSEEIYFGD
ITNGAADDLRKVTQYATSMVTSLGMSPKIGPVNFEVAEDGFNKPYSEETANVIDHEIRRI
ISEAHTKCHELIRSKSKEMDLVAEELLKKEVITREDMIRLLGKRPWSEKNDAFDKYLDNK
EVKMADKAQSEAKEIEKDENEVKKDDEEEKKDDSKDGKDKEEK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG