YALI0B02552g

Overview

Description weakly similar to uniprot|D5GLE0 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0B02552g

Location

Species Yarrowia lipolytica Positions 390822..392721
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1900 (nuc.)
Previous locus YALI0B02544g Next locus YALI0B02574g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B02552g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B02552gYALI0B02552g_mRNA-001YALI0B02552g_CDS-001

Nucleotide sequence

 

>YALI0B02552g
ATGGATATTTTAGAAGACACGACGGAAGAAAGCAACTACTCTTCGATCCCCACGACGCCG
CGGATCAACAAGAAAAAAGAACGGCCCTCGTCCACCTACTCAAACCTCCGATTGTCCATC
TATGGAGAAGACGACAAGGGACTACTACCGGCTCCAGTCACCTCCGGCTCCTCCACAAAC
TACTCTGCAGGTCTACCGTCTCTCGCGCAGCTCGCAGACCTACCCACAGCCCCACCACCT
CAATGGACCCAAGCAGGAATGACAGGATCGCCCAGTAGAGCCTCATTTCGTGCACCATCA
CCTACGCGCAACAGCCCCCTAATGCCTCCTCGATCGAGATCTCCCATGCGATCACAGAGT
CCCCAACGGCCACAGAGCGGTATCTGGGACGGCAAATTCGACCCTCGAGCCGACTCAAAC
GGCTTCTTGACCCCCAACAATACCAATGCAACAACCAACACAGCAAACAATTCCACAACT
AGCGTCAACAATGCCAACCCTTTCAATTTTGAACAGACCACATACTCGCTGTCACCGCCG
GTCAAGCCGTCGCAACGACGAGGTCACAGATACAAACACTCCTCGGTGTCAATCAACTTC
TTCGAGGAGCCAAATAAAGCGCCCTTGGCCATCCCGAAATCGCACCCCATCCCTAACGCA
AAAGAGGCGCTGCAGTCCATGTCACGTGACCAGCGTGCTCGTATGTGCTGGTCTGGCGTT
CATCTGCTGGCGGCGTTTGTCATCTTTTCTCTATCATCGCATGACTACACTGCGTTGGCT
GCTTTGGCGCATCTTGTGCTGTATGATGCTCTGGGAGCTACTCTTACAGCTGCAGTCGAT
ATTTTAGGTAACTTTGAGGTGTGGAAGAAGTCGTCGATCCACCATCCCTTTGGTCTTCAG
CGAGCTGAGGTTCTGGCTGGTTTTGCGCTTTCCGTCGCTCTCATTTTCATGGGTGGAGAT
CTCCTTTCTCACTCTGTAGAGACTGTGGTTGAGGTGTTCTACGATGCGGACCATGTAGTG
CACGATCACAATTCTGATATGACATCTGTGCCCCATGCTGACGACCATGGTCACAGAAAC
ACCCATGGACATGGTCATGGGCATAGCAAGGATGGAACCTCTGTGCTTTCAGGAACCGAT
CTCAGCATCACCATTCTTGCTCTTCTGGTGACCGTCATTTCTGCCTACGGATTGAAGAAC
CATCAGCGAATCGGAAAAGCTATGCGACACAACACTCTTGCCCAGCTTCCTCTTCCCTCT
TTCCTTTCCAACCCTTCGCATTTGATGACCATCACCTCTTCGCTGGCTATTATTTCTTAC
CTTCTCTTCCCCGGGTCTGGCTCTGAGGTTCTCGATTCCATTGTCACTCCTATCATTGCA
CTTTCAATGTGCTACGTTGGTTGGCAGCTGGCCAAGTCCCTTGGAGGAATGCTCATCATG
TCGTTTCCCGGTGTTAACCGAATCTCTGATATTGAACAGGCCATTCTGGCTGAGAACCTT
GTCAAGTCCGTCTCCGACGTGTCGTTCTGGCAGGTTCACCACAACCTGTGTCTCGTCAGT
ATGCGGATAGAGATGAACCAGGCTTCCAGTATGGAGGAGCAGGCTCTCAAGGCACGCGCT
GCTGAGATTGCAAAGAACATCCTCACGCCGGACTACGAGGATATGCTGGATCAAGTGAGG
TGGGAAACCACGATTGATATCACCAGATAGTTGGCTGAGCAAACTATCGCATCAGAGCTA
CCGTTGAAGGATTGAAATCACAGGAATCACGAGGAACTCGATGTAAATGGAGTAGTTTGA
CTGCTCCTTGCCTCCACATAGCTCACAATTGTAGTGTATAGAGCCCAAGGTACAGGTGCT
GTACTTTAAGGACACACTACTTAATAGATTCATACCATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B02552g_CDS-001

Protein length: 570 aa.
Product: Conserved hypothetical protein

>YALI0B02552g_CDS-001 MDILEDTTEESNYSSIPTTPRINKKKERPSSTYSNLRLSIYGEDDKGLLPAPVTSGSSTN
YSAGLPSLAQLADLPTAPPPQWTQAGMTGSPSRASFRAPSPTRNSPLMPPRSRSPMRSQS
PQRPQSGIWDGKFDPRADSNGFLTPNNTNATTNTANNSTTSVNNANPFNFEQTTYSLSPP
VKPSQRRGHRYKHSSVSINFFEEPNKAPLAIPKSHPIPNAKEALQSMSRDQRARMCWSGV
HLLAAFVIFSLSSHDYTALAALAHLVLYDALGATLTAAVDILGNFEVWKKSSIHHPFGLQ
RAEVLAGFALSVALIFMGGDLLSHSVETVVEVFYDADHVVHDHNSDMTSVPHADDHGHRN
THGHGHGHSKDGTSVLSGTDLSITILALLVTVISAYGLKNHQRIGKAMRHNTLAQLPLPS
FLSNPSHLMTITSSLAIISYLLFPGSGSEVLDSIVTPIIALSMCYVGWQLAKSLGGMLIM
SFPGVNRISDIEQAILAENLVKSVSDVSFWQVHHNLCLVSMRIEMNQASSMEEQALKARA
AEIAKNILTPDYEDMLDQVRWETTIDITR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG