YALI0B00990g

Overview

Description highly similar to uniprot|Q02892 Saccharomyces cerevisiae YPL093W NOG1 Putative GTPase that associates with free 60S ribosomal subunits in the nucleolus and is required for 60S ribosomal subunit biogenesis
Locus type CDS
Locus tag YALI0B00990g

Location

Species Yarrowia lipolytica Positions 164316..166427
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 2112 (nuc.)
Previous locus YALI0B00968g Next locus YALI0B01012g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B00990g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B00990gYALI0B00990g_mRNA-001YALI0B00990g_CDS-001

Nucleotide sequence

 

>YALI0B00990g
ATGCAACTAACGTGGAAAGATATTCCGACGATTCCGAACCAGAGCGAGTTTCTGGACATT
GTGCTGAACCGGACGCAGCGAAAGACGCCCACGGTGATTCGAGCCGGGTTCAAAATCTCG
CGAATCCGGGCGTTTTACATGCGAAAAGTGCGATTCACAGCGGACGGATTTGTGGAGAAG
CTCAACGAGATTGTCACGTCGTTCCCCAACATTAACGAAATCCACCCGTTCCATCGAGAC
CTGCTCGATACCCTGTACGAGAAGAACCACTACAAGGTGTCTCTGGCATCCCTGTCCCGA
GCCAAGTCGCTCATCGATCAGGTGTCACGTGATTACGTGCGTCTGCTCAAGTTTGGTCAG
TCTCTTTTCCAGTGCAAGCAGCTCAAGCGGGCTGCTCTTGGTCGTATGGCCACCATTATG
AAGCGGCTTAAGGACCCTCTTGTCTATCTTGAGCAAGTTCGGCAGCATCTTGGTCGATTG
CCCTCCATCGATCCCAACACTCGAACCCTGCTCATCTGTGGCTATCCCAATGTTGGCAAG
TCTTCGTTCCTCAAGTCTGTGACTCGAGCCGAGGTCGAGGTCCAGCCCTATGCGTTTACC
ACCAAGTCTCTGTATGTCGGTCATTTCGACTACAAGTATCTGCGGTTCCAGGCGATTGAC
ACTCCCGGTATTCTGGACCGTCCCACCGAGGAGATGAACAACATTGAAATGCAGTCCATC
TACGCCATTGCCCACATTCGGTCGTGTGTGCTGTATTTCATGGACGTTTCCGAGCAGTGT
GGCTTTTCTGTGGCCGAGCAGGTCAAGCTGTTCCATTCCATCAAGCCGCTGTTTGCCAAC
AAGCAGGTGATTGTGGTCATCAACAAGATTGACGTCAAGCGACCGGAGGATCTGGATGAG
GAGAACCAGGAGCTTCTCAAGGGCATTGCTGCCCAGCCCGACGTGGAGATTATGCAGCTG
TCGTGCCATGCCGAGGAGGGTCTTATGGAGGTGCGAAACCGGGCGTGCGAGAAGCTGTTG
GCGGCTCGAGTGGAGCAGAAGCTGCGTCATGTCAAGGGTGGCGCCTCTTCCGATCTGCTC
AACCAGGTCCATATTGCCCAGCCCGTCAAGCGAGACGACATTGAGCGGCCCTCGGCTGTG
CCTGAGGCGGTCCAGTTCCTGCAAAAGTACGACAAGAACGACCCCAACAGACGAAAGCTG
ATGCGGGACATTCAGGACGAAAATGGAGGCGCTGGAGTCTTTTCCATTGACATGTCCAAG
GATTATCTGCTGGAGGACGAGGCCTGGAAGAAGGACATTATGCCCGAGCTGCTCAACGGC
CGAAATGTCTACGATTTCATCGACCCCGATATCGCCTCGAAGCTCCAGGCGCTGGAGGAC
GAGGAGGAGAAACTCGAGCAGGAGGGCTTCTACGACTCGGAGGAGGAAATTGAGGACGAC
GAGGCCGAGGATATCCACGAGCAGGCCCAGTGGCTGCGAAACAAGATCAAAATGATGCGA
AACACGGCCCGGTCCAAGAAGTCACTCAAAAACAAGGCCGCCATCCCCAGAACAAAGACC
AAAAAGTCGCTGGGAGACATGGAGGAGCATCTGGAGCGAGTGGGCTTCGATTCGTCTAAG
GTGGTGGACCGAGCCAACGCCCTGGCCGAAGCCAAGGCCTCCGACGACGTGTCGGGCCAC
CAGACCTTCCTCAACGAGGCCGTCTCCACCCAGGAAATGTCCCTCATGCCCCTGGGCCAG
TCCAACCGACGAGACGATGGTATTGTCACCACCGTGCGATCCAAGGCCGACCGAATGGCC
AAGCACTCCCAGCGAAAGGGTAACATGAAGGCCCGACGAGGAGAGGCCGATCGACATATT
GCCGAGACCAAGCCCAAGCATTTGTTTTCCGGAAAGAGAACTGTTGGATCGAATGATTGG
AGATAGACAAAGTTTGAGGACGTAGTCCGAAACCGAGTCGGATTCAAGACATGGACGGTA
TTGATTACGGTATTGATTTGGTCGGCTCAGTGTCTCCAACCAACCTGGTTGGGTACTCAC
TTGGTCGTCACCTGGATTAGATAGATGGATCACGGAAAAGTTTTATATTAATAGATTGAG
CATTGATTGAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B00990g_CDS-001

Protein length: 642 aa.
Product: GTPase, putative

>YALI0B00990g_CDS-001 MQLTWKDIPTIPNQSEFLDIVLNRTQRKTPTVIRAGFKISRIRAFYMRKVRFTADGFVEK
LNEIVTSFPNINEIHPFHRDLLDTLYEKNHYKVSLASLSRAKSLIDQVSRDYVRLLKFGQ
SLFQCKQLKRAALGRMATIMKRLKDPLVYLEQVRQHLGRLPSIDPNTRTLLICGYPNVGK
SSFLKSVTRAEVEVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDRPTEEMNNIEMQSI
YAIAHIRSCVLYFMDVSEQCGFSVAEQVKLFHSIKPLFANKQVIVVINKIDVKRPEDLDE
ENQELLKGIAAQPDVEIMQLSCHAEEGLMEVRNRACEKLLAARVEQKLRHVKGGASSDLL
NQVHIAQPVKRDDIERPSAVPEAVQFLQKYDKNDPNRRKLMRDIQDENGGAGVFSIDMSK
DYLLEDEAWKKDIMPELLNGRNVYDFIDPDIASKLQALEDEEEKLEQEGFYDSEEEIEDD
EAEDIHEQAQWLRNKIKMMRNTARSKKSLKNKAAIPRTKTKKSLGDMEEHLERVGFDSSK
VVDRANALAEAKASDDVSGHQTFLNEAVSTQEMSLMPLGQSNRRDDGIVTTVRSKADRMA
KHSQRKGNMKARRGEADRHIAETKPKHLFSGKRTVGSNDWR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG