YALI0F30877g

Overview

Description similar to uniprot|P40202 Saccharomyces cerevisiae YMR038c LYS7 copper chaperone for superoxide dismutase
Locus type CDS
Locus tag YALI0F30877g

Location

Species Yarrowia lipolytica Positions 3853278..3854122
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 845 (nuc.)
Previous locus YALI0F30855g Next locus YALI0F30899g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30877g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30877gYALI0F30877g_mRNA-001YALI0F30877g_CDS-001

Nucleotide sequence

 

>YALI0F30877g
ATGTCATTTACTGTGAGTAAAAAGCGAACAGAAACCGGAACTGGGAACCTCATCCGACTC
TTTTTCCAGTGCTATAAATTTCACTACTAACGCCAGACTACATTTGCTGTCCCTTTGGAA
TGTGAGTCCTGCTGTGATTCCGTCAAGCAGGCACTTGCAAACGTCCAGGGCATCGAGTCC
GTTGACTGCAAGCTCGTGGATCAGCTTATCAGTGTCACTGGAACTTCTGCTCCGTCCCAG
ATTGTAAAGGCCGTCCAAAACATCGGCAAGGACGCCATTGTTCGAGGCACTGGACAGCCC
AACTCGGCAGCCGTCTGCATTCTCGAAAGCCACGCCCCCGAAGACCAGGCCCAACCTATA
AAGGGCCTTGCCCGAATCGTCAGTGTCTCCAAGACCCTTGCGCTCATCGATATCACCCTC
AACGGTCTTCCCAAGGGCACATACTACCCCAGCATCCGTACCAGTGGAGACATCTCTGAT
GCGCCTCAGAGTCTAGGAGGCGTATACCAGGCGCTGGGCAGCGTGGAGGTGAACGAGTCT
GACAGTGCATCTGGACTCTTTTCCGGCCAAGCATTTGTCAAGTCCGAGACCCAGATCTCC
AGTCTTATTGGCCGGGGCATGGCTGTTTCTACAAGCCCAGACGTTGTCAAGCCTCACGCT
CTGGTGGGTGTGATTGCACGAAGCGCTGGCGTGTGGGAGAATGATAAGACTGTGTGTTCC
TGCAGCGGAAAGACAGTTTGGGAGGAGCGAAAGGACGTCCAGAGTAAGGGACTCGAGGGC
CAGCTCTAAGTGTCCCCTTCTATTATTATAATTGATCAATCGCATTTTCAAATTCATTTC
ATTTA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F30877g_CDS-001

Protein length: 235 aa.
Product: Copper chaperone for superoxide dismutase Sod1p, putative

>YALI0F30877g_CDS-001 MSFTTTFAVPLECESCCDSVKQALANVQGIESVDCKLVDQLISVTGTSAPSQIVKAVQNI
GKDAIVRGTGQPNSAAVCILESHAPEDQAQPIKGLARIVSVSKTLALIDITLNGLPKGTY
YPSIRTSGDISDAPQSLGGVYQALGSVEVNESDSASGLFSGQAFVKSETQISSLIGRGMA
VSTSPDVVKPHALVGVIARSAGVWENDKTVCSCSGKTVWEERKDVQSKGLEGQL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG