YALI0F30833g

Overview

Description similar to uniprot|Q06702 Saccharomyces cerevisiae YLR307w CDA1 sporulation-specific chitin deacetylase
Locus type CDS
Locus tag YALI0F30833g

Location

Species Yarrowia lipolytica Positions 3848304..3849266
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 963 (nuc.)
Previous locus YALI0F30811g Next locus YALI0F30855g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30833g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30833gYALI0F30833g_mRNA-001YALI0F30833g_CDS-001

Nucleotide sequence

 

>YALI0F30833g
ATGGCCGCCGAACCCTTCCCCCCGTGGTTGACGGCTTTCACAGGCCTGACAGCTTGGCCT
CAAGACAATCCCCCTTACATCCCGTTGGACTACGTTGATCTCGCGACCGTTCCGAATCAC
ATTGCTAAGCGTGAACTTGGTATCTGTGACGGAGTCGAGCGCACCGCCTGCTCCTTCGAC
TGCCATTTGTGTATTGCTTTCGACGACATCCGCACTTGCAACAAGATATCCCAAACATTT
GACGACGGGCCCAGCCCTAGCACACCAAAACTTCTGGAAATGCTTCCCTCAAAAACAACC
TTCTTTGTCCAGGGCGTCAATGTCGTCCGCTTCCCAGAGATCTTCAGGGAGCAATACCGC
CAGGGCCATCTGTTGGCCAGTCACACCTGGTCTCACCCAAACCTCGCCTCGCTTAGCAAT
GAAGAGATAGTCGCACAACTACAATGGACTAACTGGGCTATGAACGCCACTGCCGGTATC
ATCCCACGCTACTTCCGTCCCCCCTATGGCGCTATCGACAACCGTGTACGTGCTATTGTA
CGGATGCTGGGCATGCAGTCTGTGTTGTGGGACCGAGACACATTTGATTGGAAGGTTAAC
GCCGGTATTAAGACCTCCCCTGAGGTCGTGGAAGAGGTCCAAGACTGGAAACTGCAGGGT
GGAGGCTGGGGTTTGATCCTCGAGCACGATACTACCATCAAGACTGTCAACGTTGGACTT
GATGTTGCCAAAGCTCTTGGGCCGAACCAGCTTACCGTTGCCGAGTGCGTGGGTCAGACA
CAATGGTACCAGGATCCAGCACGGTTGGGTAACGAGCCCCGCCGTGGCCACCGAGCAGCT
TCGTACCAAAGGAGTTGACATTGTTGACCCCATTGCTGTATAAAAATAGTGCGTAAGTAT
GTAAAGCGAATATAGCAATCATTACAATTACAGAGACTACAAGTTCTTGTAGTGAAGATA
TAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30833g_CDS-001

Protein length: 286 aa.
Product: Chitin deacetylase, putative

>YALI0F30833g_CDS-001 MAAEPFPPWLTAFTGLTAWPQDNPPYIPLDYVDLATVPNHIAKRELGICDGVERTACSFD
CHLCIAFDDIRTCNKISQTFDDGPSPSTPKLLEMLPSKTTFFVQGVNVVRFPEIFREQYR
QGHLLASHTWSHPNLASLSNEEIVAQLQWTNWAMNATAGIIPRYFRPPYGAIDNRVRAIV
RMLGMQSVLWDRDTFDWKVNAGIKTSPEVVEEVQDWKLQGGGWGLILEHDTTIKTVNVGL
DVAKALGPNQLTVAECVGQTQWYQDPARLGNEPRRGHRAASYQRS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG